Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq428 87.8 1e-11 >seq428 Length=31006 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 435118 GGTCTTGGACCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAAT 435177 |||||| ||| | || || |||||||| | ||||| |||||||||||| | ||| || Sbjct 20938 GGTCTTACACCCTCCGAGTTCTTCTTCCACGCCATGGCCGGTCGTGAAGGTCTCATTGAT 20879 Query 435178 ACAGCTATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAA 435237 ||||| | || || ||||| |||||||| ||||| ||| || |||||| || ||| Sbjct 20878 ACAGCCGTCAAGACAGCTGAAACTGGTTACATTCAGAGACGTCTGGTCAAGGCTCTGGAA 20819 Query 435238 GAT 435240 ||| Sbjct 20818 GAT 20816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740553221443272