Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq363 120 4e-22
>seq363
Length=36312
Score = 120 bits (132), Expect = 4e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930
||||| |||| |||||| || || || | | ||||||| | || || | || |
Sbjct 13358 AATCTCCAGCTCGGGGAACGGCCGAGGCTCACGCTCCAGCTGCGTCTTGAGAGCGTCGAT 13417
Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990
||||| || ||||||||| ||||| |||| | ||| | | || ||| || |
Sbjct 13418 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATC 13477
Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050
| |||||| || | ||||| |||||||||| |||||||| ||||||||||||| ||
Sbjct 13478 GCACACGTGAGCGAGCATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCC 13537
Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
||||||||||| | |||| |||||| ||||||||
Sbjct 13538 GAGGCCCATGTCGCAGGACCGCTGGTATAGCTGGCA 13573
Score = 116 bits (128), Expect = 4e-21
Identities = 163/226 (72%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCC-GCAGTCCACGTACCTGGCCCCAA 147289
||||||||| ||||||| ||| |||||| | | ||| ||||||||| ||| ||||
Sbjct 13775 CAGCTGGTCGACGCCCTTGCCGGCGTAGTCCGCCTTTGCA-TCCACGTACTCGGCGCCAA 13833
Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349
|||||| ||||||||||||||| || || |||||||| ||| || | ||| | | ||
Sbjct 13834 AGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCACCGACCTCGCGGTGGGTCAGGC 13893
Query 147350 CCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGG 147409
| | | | ||| |||||| ||||||| | | |||||||||| || || | ||
Sbjct 13894 CGACGCTGTCGAGGAACTCGCGGGACCCATTGCCGTCCCAGATCTTGACGCCGACGTCGT 13953
Query 147410 AGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455
||| | |||| ||| |||| |||||||||||| |||||
Sbjct 13954 TGAGGGCGATAGAAGATGTGTTGCCCTCGATGAACCAGAGGAGCTC 13999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583476534460800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |