Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq246 125 2e-23
>seq246
Length=51316
Score = 125 bits (138), Expect = 2e-23
Identities = 360/540 (67%), Gaps = 19/540 (4%)
Strand=Plus/Minus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| || ||||||||||| |||||||| || ||||||||| | || ||
Sbjct 23765 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGATTGGAATAACCGCCTG 23706
Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452
| |||| || || | ||||| | |||| ||||||||||||| | ||
Sbjct 23705 AATG---ATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGA 23650
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512
|| || ||| ||||| ||||| ||| ||| || ||| | | |||||||
Sbjct 23649 TGGCATTGTCAACGAGAACCTGGTCGAGCGCTTCAGCGGCGAGGTCCAGATCCCCGAGGC 23590
Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572
|| | |||||||| ||||| | ||||||||||| ||| ||||| |||| |
Sbjct 23589 TCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 23530
Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631
| | ||| | || ||| || || || || ||||| | | ||| || || ||
Sbjct 23529 GCTCATCGACAC-CTACATC--AAGGAGAACAGCCAGCGCAGCTACCTCTTCAACGC-CA 23474
Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688
| ||||| || |||| | ||| | |||||| | ||||| || | ||
Sbjct 23473 TTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAG-GAC 23415
Query 443689 AAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747
|| | ||| | || | | |||| || || || ||||||| ||||| || | || ||
Sbjct 23414 AAGAACTCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTC 23355
Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807
||||| |||| ||||||||||||||| | || ||||| || || |||| ||||||||
Sbjct 23354 AGCGGTGCCTTT-GCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGAC 23296
Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|||| ||||| || ||| ||| ||||||||| |||| ||||| ||||| || ||
Sbjct 23295 CTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGCCTGCCTGCT 23236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588304008927540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |