Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq330 89.7 4e-13
>seq330
Length=39978
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTCATCAAGCTG 39140
|| || |||||||| || || || || || ||| |||| || || |||| ||||||||
Sbjct 14994 TGAAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAG-GTGCGACCGTCCTCAAGCTG 15052
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| ||||| |||||||||||||| || | ||| | | ||| |||||| ||| | |
Sbjct 15053 CTTGCCAGCAAAGATAAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCC-TGAATCT 15111
Query 39201 CTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259
|| ||||| | | | || || || || || |||| ||||| | || || |
Sbjct 15112 TTGATTTGACATTGTCGATGGTGTCTGATGATTCAACCTCCAATGTGATGGTCTTGCCGG 15171
Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284
||| ||| || || ||||| |||||
Sbjct 15172 TCAACGTCTTGACGAAGATCTGCAT 15196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429537370443236
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |