Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq363 107 2e-18 >seq363 Length=36312 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670 ||| || || | ||||| | ||| ||||| || | || | || | |||||| | ||| Sbjct 13370 GGGGAACGGCCGAGGCTCACGCTCCAGCTGCGTCTTGAGAGCGTCGATGTGGTCGATGTA 13429 Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29730 |||||| || ||||||| | |||| | ||| || | || || |||||||| Sbjct 13430 GACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATCGCACACGTGAGC 13489 Query 29731 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790 | ||||| ||||| || | |||||||||||||| ||||| | ||||| |||||||| Sbjct 13490 GAGCATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCGAGGCCCATGTC 13549 Query 29791 CCCTGACCTCTGGTAGAGCTGGCA 29814 | |||| |||||| |||||||| Sbjct 13550 GCAGGACCGCTGGTATAGCTGGCA 13573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406155418420792