Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq236 194 2e-44
>seq236
Length=53426
Score = 194 bits (214), Expect = 2e-44
Identities = 1181/1873 (63%), Gaps = 49/1873 (3%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||| || |||| | || | | ||||| || |||||||| || || || |||
Sbjct 6934 GTGAACTGGATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTGAGA 6875
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|| || |||| || ||| |||||||| || | ||| | ||||| ||
Sbjct 6874 CCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATG 6815
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
|| || |||| ||||| ||||| |||||||| || | |||||||||||| | | |
Sbjct 6814 TGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCCGCCATCTGGACA 6755
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616
|| |||| ||| ||||| | || ||| ||| | |||||||| || || |
Sbjct 6754 ATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGTGCCTTGATATCTTCGGGGATG 6695
Query 75617 TTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|| | | || |||||||| ||| |||| || || ||||| || |||| |
Sbjct 6694 TTGGGAATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATGGCATCGGAC 6635
Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733
|| | | ||| | | | || || || || |||| || || || ||
Sbjct 6634 CAGAGGCCAGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCG 6575
Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793
| | || | ||| ||| || || || || || || | | || ||||| |||
Sbjct 6574 GCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTACCC 6515
Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853
| ||| || | || ||||| |||||||| || | | || || || | |||
Sbjct 6514 AGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTTGCGCGTACC- 6456
Query 75854 TGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911
||| || |||| | || || || | | ||| ||||| || || || ||| ||||
Sbjct 6455 -GTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGAGGGTTTGACAT 6397
Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAG 75971
|||| | ||| |||| || || || | | ||| |||||| || ||| |||||| |
Sbjct 6396 CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAATGATTCGTAGG 6337
Query 75972 TCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGA 76031
|| ||| | || | || | ||||| | || | | || || || || |
Sbjct 6336 GACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGGTAGATGGTCTCAA 6277
Query 76032 AAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG--AAT 76089
| |||| ||| || || | | || || || ||||| || ||| | | ||
Sbjct 6276 AGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAGGGC--ATGCGCAGGGCAAG 6219
Query 76090 AAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 76149
|| || || || || ||||| || |||| ||||| |||| || | | ||||| |
Sbjct 6218 GAAAGCGTCGGCAAGACCCTGGACACCAACGCCAATGGGTCGGTGGCGCATATTGCTG-T 6160
Query 76150 TTCAG--CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207
| | | || ||||| |||||| | || | ||| || || || ||||| || | ||||
Sbjct 6159 TGCGGGCCTCCTGGAC-AGGGTAGTGGTTGACATCAATGATCTTGTTGAGGTTGCGGACA 6101
Query 76208 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT-----ATC-ACA 76261
|| || || || || | || || ||| ||| | || || ||| |||
Sbjct 6100 ACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCGTTGTAATCGACA 6041
Query 76262 AACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA--- 76318
| | || || | ||| || | || ||||| || ||||||| | | |||
Sbjct 6040 TAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGGA---GCACAG 5984
Query 76319 TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTG 76378
|| | || ||||| ||||| || || | ||| ||||| || || | ||||||
Sbjct 5983 TACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTG 5924
Query 76379 CTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGAT 76438
||||| ||| || | ||||| || || | || || | ||||| || |||| | |
Sbjct 5923 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCT 5864
Query 76439 TCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGT-ATCGCTTCTCTC 76496
|| | || || | ||| | | ||| ||| || || ||| | | | || |||
Sbjct 5863 TCCAGGATGGAATACCACA-GCTTCTGAGCGCGAAT---AGTCTTGCGACCACGTCCCTC 5808
Query 76497 --TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAAACCA 76552
| || |||| ||| || || || || ||| ||| | || ||| ||| |||
Sbjct 5807 CCTCTCGTATTTCTCATACAAAGCCTCGAACTC--CTCGCCATAGCAGTCAGCCAGGCCA 5750
Query 76553 GGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCATAAA 76611
|| ||||| || || ||||| | | ||| || | ||||| | ||| || ||||| ||
Sbjct 5749 GGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTC-TCAACACGCTTCATGAA 5691
Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGT 76671
|||||| || ||||| ||||||| || | || || | | ||||| || ||
Sbjct 5690 GAGATCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTG 5631
Query 76672 ATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 76731
||||| ||||| |||||||| | | || | ||||| || || || || || ||
Sbjct 5630 GTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGC 5571
Query 76732 CATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAAC 76791
| |||| || || || ||||| ||||| || | ||||||||||||||| || | ||
Sbjct 5570 AAAGGCACCAGGACGCTTGTTACCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAGAC 5511
Query 76792 TCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACA 76851
|| | ||| |||||||| |||||||| ||||| || || |||| ||| ||| ||
Sbjct 5510 TCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGCCGGT 5451
Query 76852 TGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 76911
||||| || | | | ||| || || || ||||| || || || | |||||
Sbjct 5450 GGCACGGATGCGATGGACGTTCAAGCCGATACCACCAGCCATCTTGGAAATCATGGCACA 5391
Query 76912 GCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACA 76971
|||| ||||||||||| ||||| || ||||| ||| |||||| | | || ||
Sbjct 5390 TGTCTTCAGAGTGTCATAGATACCCTCGATGCTATCGTCCTTCATGTCGACCAAGAAGCA 5331
Query 76972 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAA 77031
|||| || || || ||||| || |||| || ||||| |||||||||||
Sbjct 5330 TGAGGACAGCTGGGCTTGCGGGGTACCTGCGTTGAACAGGGTGGGAGAGGCATGAGTGAA 5271
Query 77032 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATTGAT 77087
| || ||| | || |||||||| || | || || || || || |||
Sbjct 5270 GAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCGTCTCCCCAGAT 5211
Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147
| || |||| || ||||| | ||| ||||| || || || ||| |||| || |
Sbjct 5210 G----CCAACAGACACTCGCATAATCATGTGCTGGGGCCGCTCAACAATCTTGCCATCAA 5155
Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 77207
|||| | |||||| |||| ||| || || || || || | ||| |||||||
Sbjct 5154 GCTTCAGAAGGTATGAACGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 5095
Query 77208 TTTCGTAAATAAT 77220
||||| | |||
Sbjct 5094 GATCGTAGACAAT 5082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712920390839040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |