Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 131 4e-25
>seq1011
Length=119094
Score = 131 bits (144), Expect = 4e-25
Identities = 273/404 (68%), Gaps = 2/404 (0%)
Strand=Plus/Plus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| ||||| ||| |||| | |||||||| || | || |||||| |||
Sbjct 29415 CCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCA 29474
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGA 230356
|| ||| ||||||||||| || | || | | || || | || | ||| |||
Sbjct 29475 TCTCTCGTGACGAGGGTCTGCACACTGACTTTGCCTGCCTGCTGCACTCTCACCTCAAGA 29534
Query 230357 ACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAG 230415
|| || | || ||| | || | ||||| || || || || || || ||
Sbjct 29535 ACCGTGCCAGCAAG-GAGGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAG 29593
Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGA 230475
|| ||| | || ||| | || || ||| | ||||||||| | | || |||
Sbjct 29594 GAATTCTTGACCGAGGCTCTCCCCTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAG 29653
Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535
||||||||||| || || |||||||| | |||| || || || ||||||| | |||
Sbjct 29654 CAGTACATCGAGTTTGTTGCCGACCGTCTGCTTGTCGCTCTCGGCAACGAGAAGATCTAC 29713
Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595
|| ||| |||||||||| || |||||| |||||| || || ||||||||||||
Sbjct 29714 AAGTCTGCCAACCCCTTTGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTC 29773
Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639
|| || ||||||||| ||||| |||| | ||||||| |||||
Sbjct 29774 TTTGAGAAGCGTGTCGCCGACTACCAGAAGGCTGGTGTCATGAA 29817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057809714748020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |