Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 100 3e-16
>seq1011
Length=119094
Score = 100 bits (110), Expect = 3e-16
Identities = 181/264 (69%), Gaps = 3/264 (1%)
Strand=Plus/Minus
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||| |||||||| || ||||| || || ||||||||||||||||| | ||
Sbjct 29211 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATC 29152
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || || || || || |||||||||| || || || || ||| || |||
Sbjct 29151 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCA 29092
Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAATATGCCAA 16678
|| || |||| ||||| ||||| || || |||||| | | | | | |||
Sbjct 29091 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 29032
Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738
|| | | ||| ||||| | ||| | ||||| | ||||| ||| ||| | |||||
Sbjct 29031 TCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAGGCCTCGGCCTTC 28972
Query 16739 TTATACATTTTCCAAATATCATTG 16762
|| ||||||| ||| || | ||||
Sbjct 28971 TTGTACATTTGCCAGATCTAATTG 28948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511407662115280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |