Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq155 206 3e-48
>seq155
Length=71478
Score = 206 bits (228), Expect = 3e-48
Identities = 519/795 (65%), Gaps = 68/795 (9%)
Strand=Plus/Minus
Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595
|||||| | ||| | |||||| || | |||||||| |||||||| | | | |||||
Sbjct 19387 TTAGACGGACATGTTCATGGGAATCGATTTGTGGGGGTCGTAGCCCTTGACCACGAAGTC 19328
Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAA 145651
||| || | || |||| ||| | || ||| ||| | ||| ||| ||| |
Sbjct 19327 CTCGACCTTCCAGCCATCGATG-CTGCCGCCCTTCTCCCGCGTAATCTCCAGCTCGGGGA 19269
Query 145652 AGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710
| ||||| || ||| | || || || || || | || | ||||| || |||||||
Sbjct 19268 ATGGCCGAGG-CTCGCGCTCCAGTTGTGTCTGGAGAGCGTCGATGTGGTCGATGTAGACG 19210
Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770
|| ||||| |||| ||||||| ||| | |||||| | || | | ||| |||| |
Sbjct 19209 TGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATCGCACACGTGAGCGAGC 19150
Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830
|||| || ||||| | |||||||| ||||||||||| | || || |||||||| |
Sbjct 19149 ATGTGTGTGAGCAGAGCATAGCTGGCGATGTTGAAGGGGATGCCGAGGCCCATGTCACAA 19090
Query 145831 GAGCGCTGGTACAGCTGGCAGGAGAGCT--CCC--------------------------- 145861
|| |||||||| ||||||||| ||| | |||
Sbjct 19089 GACCGCTGGTATAGCTGGCAGTGGAGGTGGCCCTTTGGCTTGTTCTCTTCCGTGGGTTCT 19030
Query 145862 ----CGCC--CGCCACGT----------------------AGAACTGGCACAGGAGGTGG 145893
|||| |||| ||| |||||||| | | ||||
Sbjct 19029 GCGGCGCCAACGCCCCGTCCGCGTCCAGGGTACGAGACGTAGAACTGGGCAAACATGTGG 18970
Query 145894 CAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTC 145953
|||||||||||||||||| | ||| ||| ||||||||| |||||| | |||
Sbjct 18969 CAGGGCGGCAGGGCCATGCTCTTGAAGTCTCGCGGATTCCAGGCGCTGAGGATCATTCTC 18910
Query 145954 CTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGC 146013
| | | || || | | || || | || |||||||| |||||||
Sbjct 18909 CGGTCGTAAGGATTGTTGCGAAGCTTGTGGATGATCTCGGCCAGCTGGTCGACGCCCTTG 18850
Query 146014 CCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCG 146073
|| ||| || | ||| | |||||||||| |||| || ||||||| |||||| ||||||
Sbjct 18849 CCGGCGTAGTCCGCCTTTGCGTCCACGTACTCGGCGCCAAAGTGCCGCCACTGAAACCCG 18790
Query 146074 TAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCC 146133
|||||||| |||||||| ||| ||| | ||| ||| ||| | | | ||||||| ||
Sbjct 18789 TAGACGGGGCCCAGGTCACCGACCTCGCGGTGGGTCAGGCCGACGCTGTCGAGGAACTCG 18730
Query 146134 CGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCG 146191
|||||||| ||| |||||||||||||||| || ||||| ||| | | |||| |
Sbjct 18729 CGGGACCCATTGCCGTCCCAGATCTTGACACCGACCTCGTTGAGGG--CGAGGGAGGATG 18672
Query 146192 TGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGG 146251
|| ||| |||||||||||| ||||| ||| ||| | | |||||||| || |
Sbjct 18671 TGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGAGGAAGACCCGTTTTG 18612
Query 146252 TGGTCAGCAGGGGGA 146266
| || ||||| ||||
Sbjct 18611 TTGTGAGCAGAGGGA 18597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590069025738160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |