Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq155 86.0 5e-12 >seq155 Length=71478 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 20936 GTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCC 20995 ||||| | |||| ||||| ||||| |||| | ||| | | ||| || ||| | Sbjct 19225 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATC 19166 Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 |||||||||| || | || || || || |||||||||||||| || |||| || Sbjct 19165 GCACACGTGAGCGAGCATGTGTGTGAGCAGAGCATAGCTGGCGATGTTGAAGGGGATGCC 19106 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 |||||||||||| |||| |||||| ||||||||| Sbjct 19105 GAGGCCCATGTCACAAGACCGCTGGTATAGCTGGCAG 19069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427770504949920