Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1011 105 5e-18 >seq1011 Length=119094 Score = 105 bits (116), Expect = 5e-18 Identities = 273/414 (66%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || || || || | || || | ||||| |||| |||||||| Sbjct 29369 GCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 29428 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || |||||||| || || | |||||||||||| | || |||||||| Sbjct 29429 AAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAG 29488 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||||| ||| ||||||||| || ||||| | | | ||| ||||||| ||| Sbjct 29489 GGTCTGCACACTGACTTTGCCTGCCTGCTG--CACTCTCACCTCAA--GAACCGTGCCAG 29544 Query 22930 GACGATGCACATC----AAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 | | | ||| | ||||| | ||||| || |||||| || ||||| Sbjct 29545 CAAGGAGGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAGGAATTCTTGAC 29604 Query 22986 AGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACA 23045 ||||| || |||| || || ||||| || |||| | |||||| | Sbjct 29605 CGAGGCTCTCCCCTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATCGA 29664 Query 23046 GTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAA 23105 ||||||||| || || ||||| | || || || | | ||||| || || |||||| Sbjct 29665 GTTTGTTGCCGACCGTCTGCTTGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTGCCAA 29724 Query 23106 TCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 || ||||| |||||||| |||||| | | || || || ||||||||||| Sbjct 29725 CCCCTTTGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTTGA 29778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356229023956762