Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq127 102 7e-17 >seq127 Length=81472 Score = 102 bits (112), Expect = 7e-17 Identities = 121/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGAACA 5651 ||||| || ||||| |||||| ||| | |||| | ||| | | ||| | |||||||| Sbjct 59355 AGCTGGGCAATTCGATCGCCCTCCTTGATCTCGTAGTCGGTTT--CCGCATGGTTGAACA 59412 Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711 | | || ||| ||||||||||| ||||| || ||||| || || |||||||| Sbjct 59413 GAAGAACCTTGACGGGTCCGCGGTAGTCTGCGTCGATGACGCCGGCACCAGTGTCGATGA 59472 Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||||| ||| ||||| ||||||||||| | ||||||| Sbjct 59473 AGTGCTTGGACGCAAGGCCAGAGCGGGGAGCAATACGGCCGT 59514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430048875682448