Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 91.5 1e-13
>seq1011
Length=119094
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| ||| | ||||| || ||||| || || |||||||| | ||||| ||||| |
Sbjct 29800 CTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTC 29741
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || || || || || |||| ||| | ||| |||| ||| | ||| | |||
Sbjct 29740 CATGAAGTCAAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACAAGCAG 29681
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820
|| || || |||||||||||||| | ||| | ||| || |||||||| | || |
Sbjct 29680 ACGGTCGGCAACAAACTCGATGTACTGCTTCATCAGGTTG-GAGTTCATGCCGAGCAGGG 29622
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAAT 119857
|| || | ||| | ||| ||||| |||| |||||
Sbjct 29621 CGCAGGGGAGAGCCTCGGTCAAGAATTCCTGCTCAAT 29585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478656093622880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |