Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1011 91.5 1e-13 >seq1011 Length=119094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||| | ||||| || ||||| || || |||||||| | ||||| ||||| | Sbjct 29800 CTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTC 29741 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || || || || || |||| ||| | ||| |||| ||| | ||| | ||| Sbjct 29740 CATGAAGTCAAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACAAGCAG 29681 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820 || || || |||||||||||||| | ||| | ||| || |||||||| | || | Sbjct 29680 ACGGTCGGCAACAAACTCGATGTACTGCTTCATCAGGTTG-GAGTTCATGCCGAGCAGGG 29622 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAAT 119857 || || | ||| | ||| ||||| |||| ||||| Sbjct 29621 CGCAGGGGAGAGCCTCGGTCAAGAATTCCTGCTCAAT 29585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656093622880