Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq160 356 6e-93
>seq160
Length=70483
Score = 356 bits (394), Expect = 6e-93
Identities = 1152/1759 (65%), Gaps = 66/1759 (4%)
Strand=Plus/Minus
Query 363434 ATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATT 363493
|||| | |||||||| || || ||||| ||| | ||||| || || |||||||| |
Sbjct 50126 ATGGCAAGATTGTTGAGCGACCACAGCACATGATCATGCGAGTGTCTGTTGGTATC---T 50070
Query 363494 GCCCGGATG---TTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTA 363546
| |||| |||| | | || ||||| || || |||| || || |
Sbjct 50069 GGGGAGATGACATTGAGCGTGTCCTGGAGACATACAACCTCATGTCTA---GCAAGT-TC 50014
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || ||| | || || ||| ||| || || || | | | ||| |||| ||
Sbjct 50013 TTCACCCATGCCTCCCCCACCCTGTTCAACGCCGGTACCCCGCAGGCCCAGCTGTCCTCA 49954
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | | |||||||| || |||||||||||||| |||||| || ||||
Sbjct 49953 TGCTTCTTGGTCGACATGAAGGATGACAGCATCGAGGGTATCTATGACACTCTGAAGACG 49894
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | |||||||||| || || || || || | | || ||||| | |||||
Sbjct 49893 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGCTTGAACG-TCCACCGCATCCGTGC 49835
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||||| ||||| || ||| || || | ||||||||||||
Sbjct 49834 CACCGG-CTCTTACATTGCTGGCACCAACGGTACCTCTAACGGTATTATTCCCATGCTTC 49776
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
| ||||| |||| ||||| || || ||||| |||||||| ||||| || || |
Sbjct 49775 GAGTGTTCAACAACACTGCCAGATATGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCCT 49716
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
|||| || || |||||||| || || || | |||||||| ||||| ||||| || |
Sbjct 49715 TTGCCATCTACCTCGAGCCCTGGCACGCTGACGTCTTTGAGTTCCTTGATCTCCGCAAGA 49656
Query 363905 AC-ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961
|| |||| || |||||| | || || ||||| ||||| ||| || ||| || | |
Sbjct 49655 ACCACGGCAAGGAAGAGG---TCCGCGCTCGTGACTTGTTCCTTGCTCTCTGGATTCCCG 49599
Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAA--GAATTGGTCACTCTTTTGCCCACACGA 364019
| | || |||||||| || ||| | | | | | ||| | ||| | ||||| ||||
Sbjct 49598 ATCTCTTCATGAAGCGTGTTGAG--AAGAACTTGGACTGGACGCTCATGTGCCCCAACGA 49541
Query 364020 ATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077
||| || || ||| | || || ||||| | | || | | ||| | || || |||||
Sbjct 49540 ATGCCCTGGCCTTGCTGACTGCTATGGCGAG--GAGTTCGAGGCTTTGTATGAGAAGTAC 49483
Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
|| ||||||| | || ||||| |||| ||| |||||||| |||| | ||||| ||
Sbjct 49482 GAGAAGGAGGGACGTGGCCGCAAGACCATTCGCGCTCAGAAGCTGTGGTATTCCATCTTG 49423
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | |||| ||||| || | |||| ||| | ||||| ||| | ||||||||||||
Sbjct 49422 GAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAG 49363
Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGA 364256
||||||| || |||| || || | || |||| |||||| || |||||||| || ||
Sbjct 49362 AGCAACCAGAAGAACCTGGGAACCA-TCCGCAGCTCCAACCTCTGCACCGAGATCATCGA 49304
Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316
||| || || |||||| ||| || || ||||| || || | || || || || |
Sbjct 49303 GTACTGTGCCCCAGACGAGGTTGCTGTTTGCAACCTGGCCTCTTTGGCCCTCCCTGCTTA 49244
Query 364317 TGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370
||| || || || | ||| || | || |||| || | ||| ||
Sbjct 49243 TGTCGACTACAACGAAGGCTGCTACGACTTTAAGAAGCTCCATGAAGTTA-CTAAGGTGG 49185
Query 364371 TACT-TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429
| | |||| || ||||| | || || || | || || | | || |||
Sbjct 49184 TTGTCCGCAACCTTAACAAGATCATTGATGTCAACCACTACCCTGTCCAGGAGGCCCGCA 49125
Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489
|| ||||| || || || |||||| ||||||| ||||| || || |||| |||
Sbjct 49124 ACAGCAACATGCGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCC 49065
Query 364490 TGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547
| ||||| ||| | ||||| || || || ||||||| || || ||| |||||||
Sbjct 49064 T--TGCTCTGCGCATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAGATCTT 49007
Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGG-GAA 364606
||| ||||| || || || | ||||| | ||| | |||||| | |
Sbjct 49006 TGAGACAATCTACCACGCGGCCCTAGAGGCTTC------TATGGAGATCGCCAAGGTGGA 48953
Query 364607 AGTACTCTA-----CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCT 364661
| | ||| | | |||| || ||| || |||| | |||| || || |
Sbjct 48952 GGGTCCCTATGAATCATTCAAGGGATCACCTGCATCCGAGGGCATCCTCCAATTCGACAT 48893
Query 364662 ATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGA 364720
||| |||||| ||| |||| || ||| | ||||| |||| | | | | | |||
Sbjct 48892 GTGGGATGTCAAGCCCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGC-AGATCAAGG 48834
Query 364721 AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGA 364780
|||| ||||| |||||| | | | || || ||||| || || ||| | ||||
Sbjct 48833 AGCACGGTACGCGCAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGA 48774
Query 364781 TCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTC 364840
| || || ||||||||||||||||| || | || ||| | || || || || |
Sbjct 48773 TTCTGGGCAACAACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCC 48714
Query 364841 TTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGC 364900
|| |||| || || | ||| || || | || ||||||| || |||| ||| |
Sbjct 48713 TTGCCGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCC 48654
Query 364901 TGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC 364960
| ||| || |||||||||| |||||| || | || || || | |||||||| |
Sbjct 48653 TCTGGTCCGATGCCATGAAGAACCGTATCATTGCTGAGAACGGCTCCATTCAGAACATCC 48594
Query 364961 CAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG-- 365018
| | || |||||| | ||| | ||||||| ||||| ||||| ||||| |||
Sbjct 48593 CCAACATCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGCC 48534
Query 365019 -AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077
|| | || | |||||||| ||||| |||||||| || |||| |||||| | |
Sbjct 48533 AAATTGTC---CAGATGGCGGCTGATCGTGGTGCTTTCATTGATCAGTCCCAGTCCCTGA 48477
Query 365078 ACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGA 365137
|| | ||||| | || || | |||| |||| |||||| ||| || ||||
Sbjct 48476 ACATCCACATGAAGGACCCCACAATGGGCAAGATTACCAGCATGCACTTCACTGGCTGGA 48417
Query 365138 AATCCGGTCTTAAGACAGG 365156
| ||||| ||||| ||
Sbjct 48416 AGCTTGGTCTCAAGACCGG 48398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303335999024228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |