Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq160 167 2e-36
seq378 127 2e-24
seq434 116 3e-21
seq422 98.7 9e-16
>seq160
Length=70483
Score = 167 bits (184), Expect = 2e-36
Identities = 846/1326 (64%), Gaps = 33/1326 (2%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||||||||| | ||||| ||| || | ||| || ||| ||||
Sbjct 48689 TTGACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGC 48748
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | || | || || ||||| || |
Sbjct 48749 TCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGG 48808
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || |||||| ||||||| |||||| | ||||| |||| |||| |||||
Sbjct 48809 AGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCAC 48868
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC-GCTGGCGGGGCT 145296
|| || ||| | || |||||||||||| | || | |||||||| | || || | |
Sbjct 48869 AGGTCAGAGGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGAT 48928
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356
||||| || || || ||| ||||||| ||| | ||||| || ||
Sbjct 48929 CCCTTG-AATGATTCATAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCTAGGGC 48987
Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416
|| || |||||||| || ||| |||| ||| || || ||| |
Sbjct 48988 CGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAA 49047
Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476
||||||||||| | ||||| ||||| || ||||| | || || || ||||| ||
Sbjct 49048 GGGCATGCGCAGAGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCG 49107
Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTT 145536
|| ||||||||| | | ||| || || ||| || | || || || || ||
Sbjct 49108 GTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGGTTGACATCAATGATCTT 49167
Query 145537 ATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGC 145596
|| | ||| || || || ||||| |||| | | | ||| | |||||| | | |||
Sbjct 49168 GTTAAGGTTGCGGACAACCACCTTAGTAACTTCATGGAGCTTCTTAAAGTCGTAGC-AGC 49226
Query 145597 C-TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCT 145655
| |||| | | ||| | | || ||| | || |||| || ||||| || ||
Sbjct 49227 CTTCGTTGTAGTCGACATAAGCAGGGAGGGCCAAAGAGGCCAGGTTGCAAACAGCAACCT 49286
Query 145656 CCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCA 145715
| || | | | | ||| | | |||||||| ||| | ||| | |||||||||||
Sbjct 49287 CGTCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCA 49346
Query 145716 GATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAG 145775
| || | ||| || || || | |||||| || ||||||||||||||| | || ||||
Sbjct 49347 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAG 49406
Query 145776 TCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGT 145835
|||| ||| | ||||| ||| || || | ||| || || | || ||
Sbjct 49407 TCTCGGTCTGGGCCTCCAAGATGGAATACCACAGCTTCTGAGCGCGAATGGTCTTGCGGC 49466
Query 145836 AGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGG 145895
|| ||||| | ||||| ||| || | |||| ||| | || ||||| || |
Sbjct 49467 CACGTCCCTCCTTCTCGTACTTCTCATACAAAGCCTCGAACTCCTCGCCATAGCAGTCAG 49526
Query 145896 ACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCT 145955
||||| || || | |||||| ||||| |||| ||| | ||| | || ||||
Sbjct 49527 CAAGGCCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTCTCAACACGCT 49586
Query 145956 CCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAG 146015
||| || | ||| || | ||| || || | |||||| || || || ||||
Sbjct 49587 TCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGAGC---GCGGACCTCTT 49643
Query 146016 C--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCACGGTTC 146070
| || || ||| || | || ||| | ||| | ||| ||| |||||||| || ||
Sbjct 49644 CCTTGCCGTGGTTCTTGC-GGAGATCAAGGA-ACTCAAAGACGTCAGCGTGCCAGGGCTC 49701
Query 146071 AATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCAT 146127
| |||| ||| | ||| || || ||| |||||||| || || | | | |
Sbjct 49702 GAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGT 49761
Query 146128 GTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT---AG-AGT 146183
|||||| || || || | |||||| | ||| | | ||||| || || | |
Sbjct 49762 GTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAAT 49821
Query 146184 TTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTAC 146242
|| | |||| || || | || || || |||| ||||| ||| || ||| | |
Sbjct 49822 GTA----AGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCAT-C 49876
Query 146243 TTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTT 146299
||||| || ||| || ||| | || || || ||||| || || ||||| || |||
Sbjct 49877 TTGGAAATCATGGCACACGTCTTC-AGAGTGTCATAGATACCCTCGATGCTGTCATCCTT 49935
Query 146300 CGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAAC 146359
| ||| ||| || ||||| ||| ||| ||| ||| ||| || || || |||||
Sbjct 49936 C--ATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCGGCGTTGAACAGG 49993
Query 146360 GTCGGG 146365
|| |||
Sbjct 49994 GTGGGG 49999
>seq378
Length=193057
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | |||||| || || || | || |||||| ||||||||||| |||||
Sbjct 156868 GCCACCACGAAGACGCAGAACCAAGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCGCT 156809
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||| || |||||||| || || |||| || ||||||||||| |||||
Sbjct 156808 CAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGG 156749
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || || ||||| | || | || |||| || || |
Sbjct 156748 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCAC 156689
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || ||||| ||||| || |||||||| |||||
Sbjct 156688 CTCGAGGGTGATTGTCTTGCCGGTCAGAGTCTTAACGAAAATTTGCAT 156641
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| ||| |
Sbjct 156125 CCACCACGAAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 156066
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| || |||||||| ||| | || | |||||||||||| |||||
Sbjct 156065 AGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGA 156006
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | ||||||| |||||||
Sbjct 156005 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCGACC 155946
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || ||||| || ||||||
Sbjct 155945 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATG 155898
Score = 102 bits (112), Expect = 8e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| ||||||||||| ||||||| ||||| |||||| |||||||| || || |
Sbjct 156604 CTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCAAGCTGCTTACCAGCAAA 156545
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCT 131161
||| | ||||||||| |||||||| || || || ||||| ||| | | || ||||| |
Sbjct 156544 GATAAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTC-CTGAATCTTTGACTTGACAT 156486
Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221
|| | || || | || || | || | || | ||| || ||||| | || || |
Sbjct 156485 TGTCGATGGTGTCTGATGATTCAACCTCCAATGTGATGGTCTTGCCGGTCAACGTCTTGA 156426
Query 131222 CGAAAATCTGCAT 131234
|||| ||||||||
Sbjct 156425 CGAAGATCTGCAT 156413
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || |||||||| || |||||||| |||
Sbjct 156411 CCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 156352
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| |||||||| || ||| |||| | ||||||||||| ||||||
Sbjct 156351 AGGGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGTCGCTGCTGGTCAGGAGGG 156292
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | ||||| | ||||| |
Sbjct 156291 ATACCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCGATGGTATCAGATGACTCCACC 156232
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| ||| | ||| || || || || || || ||||
Sbjct 156231 TCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGA 156195
>seq434
Length=177494
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 69286 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 69345
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| |||||||| || ||| |||| || |||||||||||||| ||
Sbjct 69346 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 69405
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 69406 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 69465
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 69466 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 69512
>seq422
Length=18081
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | |||||| ||||| ||||||||||| || |||
Sbjct 4402 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 4343
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 4342 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 4283
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 4282 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 4223
Query 131225 AA 131226
||
Sbjct 4222 AA 4221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472006581231360
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