Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 190 2e-43
>seq1011
Length=119094
Score = 190 bits (210), Expect = 2e-43
Identities = 489/733 (67%), Gaps = 25/733 (3%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
|| || ||||| || |||||||| ||||| | | ||||| || || || | ||
Sbjct 29676 TCGGCAACAAACTCGATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGG-GCGCA 29618
Query 92987 GGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT-- 93043
|| ||||| ||||||||||| || | ||| ||| || || || | | ||| ||
Sbjct 29617 GGGGAGAGCCTCGGTCAAGAATTCCTGCTCAATTCGGACAGCATCGGTGATGATGTCACG 29558
Query 93044 -ATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAG 93100
|| || || || ||| |||| ||| | | | || || | ||| ||||||
Sbjct 29557 GATCAC-CTCCTTGCTGGCACGGTTCTTG----AGGTGAGAGTGCAGCAGGCAGGCAAAG 29503
Query 93101 TCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAAC 93160
|| || || | ||| ||||| || || || | ||| ||| || || | ||| || |
Sbjct 29502 TCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCATG 29443
Query 93161 AGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCC 93220
|| ||||| ||||||||||| || || || ||||| ||| || || ||||| ||
Sbjct 29442 AGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCG 29383
Query 93221 ACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--CT-GATCCAT 93277
||||| ||||| || || | || | |||||| | || || || || ||||||
Sbjct 29382 ACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA---GGAAGAGTTCTTGTCCTGGATCCAC 29326
Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337
|| | ||||| ||||| || || ||| ||||| | || || || ||||| || |||
Sbjct 29325 TTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGG 29266
Query 93338 TAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCAG 93395
|| |||| | | |||| | ||||| || ||||| | ||| || || | || |
Sbjct 29265 TAGCTGCGCTGG--CTGTTCTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGTCTCGG 29208
Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455
| |||| |||||||| || ||||| |||||||| |||| ||| || | |||||| |
Sbjct 29207 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGGA 29148
Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515
| || || | ||| || || || || ||||| || ||||| || || ||||| |
Sbjct 29147 CCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAGA 29088
Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGG 93572
| |||| || || || || | ||||| ||||| || | | || | ||| |||
Sbjct 29087 AGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGT 29028
Query 93573 ATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632
||||| || || ||||| | |||||| | ||||| || || || || || || ||||
Sbjct 29027 GCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGT 28968
Query 93633 ACATATCCCATAT 93645
|||| | ||| ||
Sbjct 28967 ACATTTGCCAGAT 28955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556853463358960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |