Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 430 2e-115
seq160 367 2e-96
>seq1011
Length=119094
Score = 430 bits (476), Expect = 2e-115
Identities = 620/861 (72%), Gaps = 30/861 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| |||||||||||| |||||||| |||
Sbjct 28955 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAAGAGATTGATCTG 29014
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | || |||| | || | |||| || |||| |||| ||| ||
Sbjct 29015 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 29073
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| ||||||||||| ||||||||||| ||||| ||||| |||||||||| | |
Sbjct 29074 TCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGAGCG 29133
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | ||||| || |||||||||||||||||||| ||
Sbjct 29134 CTTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 29193
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| || ||||||| |||| |||||| |||
Sbjct 29194 GGAGAACATCCACTCCGAGACCTACTCC---CTGCTCATCGACACCTACATCAAGGAGAA 29250
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||| | | || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct 29251 CAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGC 29310
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAG 42711
|||||||| |||| |||||| || | | | || | | || | | || | ||||| |
Sbjct 29311 CGACTGGGCCATCAAGTGGATCCAG-GACAAGAACTCTTCCTTTGCCCAGCGCCTGGTTG 29369
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
||||| ||||||||||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct 29370 CCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCA 29429
Query 42772 AGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830
|| || |||| || ||||| || || ||||| || ||||| |||||| | ||||||
Sbjct 29430 AGAAGCGAGGTCTC-ATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAG 29488
Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890
|| ||||| | |||||||||||||| ||| ||| ||||||| | || ||
Sbjct 29489 GGTCTGCACACTGACTTTGCCTGCCTGCTGCACTC---TCACCTCAAGAACCGTGCCAGC 29545
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
|||||| | |||| | ||||||||| || || || || ||| |||| ||| | ||
Sbjct 29546 AAGGAGGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAGGAATTCTTGACC 29605
Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010
|| | || ||| ||||| ||||||||||| | |||| ||| |||||||| ||
Sbjct 29606 GAGGCTCTCCCCTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATCGAG 29665
Query 43011 TACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACG 43064
| || ||||||| ||| || || | | |||| || || ||||||| |
Sbjct 29666 TTTGTTGCCGACCGTCTGCT-TG-----TCGCTCTCGGCAACGAGAAGATCTACAAGTCT 29719
Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124
| |||||| ||||| ||||||||||| || | | |||||||||||||| || |||
Sbjct 29720 GCCAACCCCTTTGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTTGAG 29779
Query 43125 AAGCGCGTCGCCGACTACCAG 43145
||||| |||||||||||||||
Sbjct 29780 AAGCGTGTCGCCGACTACCAG 29800
>seq160
Length=70483
Score = 367 bits (406), Expect = 2e-96
Identities = 1122/1714 (65%), Gaps = 59/1714 (3%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| |||| || | || || | ||||||| || | ||||||||||||||||||||||
Sbjct 48347 ACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTG 48406
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| ||| |||| | || ||||||| || | ||| ||| | ||||
Sbjct 48407 AGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCAT-------TGTGGG 48459
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
||||| || || ||| ||||||||| ||| || | ||| | | || ||
Sbjct 48460 --GTCCTT---CATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCA 48514
Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976
|| ||||| || | | |||||| ||||| | | |||||||| | || ||||
Sbjct 48515 GCCGCCATCTGGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTG 48574
Query 243977 AGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036
| | ||||||| ||||||||| | ||||| || | | |||| || |
Sbjct 48575 ATATCTTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTC 48634
Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTT 244092
|||| |||| ||| ||||| | |||| ||| || ||||| | ||
Sbjct 48635 TTCATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGG----TT 48690
Query 244093 CACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTC 244152
|| ||||| ||||| || | || || || |||||||||| |||| | || |||||
Sbjct 48691 GACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTC 48750
Query 244153 GATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAG 244212
|| || ||| |||||||||| ||||| | ||| || ||||| ||||| || | | ||
Sbjct 48751 GAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAG 48810
Query 244213 CAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACAT 244272
|| ||||| | | |||||| || ||| | ||||| || ||| |||||||
Sbjct 48811 CAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAG 48870
Query 244273 GCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC-TGA 244331
| | ||||| | |||| |||||||||| || || || | |||| | ||
Sbjct 48871 GTC--AGAGGGC-------TTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGC 48921
Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCG 244390
|| | | |||| | | | |||||||| || || ||| | || | || |
Sbjct 48922 AGGTGAT-CCCTTGAATGATTCATAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCC- 48979
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|| ||||| |||| |||||| ||||| |||||| |||||||| || || |||| |
Sbjct 48980 TCTAGGGCCGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCACGAGCCTCGGGA 49039
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||||| |||| || | ||| ||||||| || ||||| || || | ||
Sbjct 49040 GACTCAAAGGGCATGCGCAGAGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCA 49099
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||||| ||| ||| ||||| | ||| || | || ||||| |||| | ||
Sbjct 49100 ATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGGTTGACATCA 49159
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|| | |||||| ||||||||| | || | | | || || ||| || |||||
Sbjct 49160 ATGATCTTGTTAAGGTTGCGGACAACCACCTTAGTA--ACTTCATGGAGCTTCTTAAAGT 49217
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688
|||| | | ||| | | || || || || | | |||||| | ||
Sbjct 49218 CGTA-------GCAGCCTTCG---TTGTAGTCGACATAAGCAGG--GAGGGCCAAAGAGG 49265
Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748
|||||||||| || || ||||| || | | ||||| || ||||||||||||||||
Sbjct 49266 CCAGGTTGCAAACAGCAACCTCGTCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGT 49325
Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808
| || |||||| ||||||| || || ||| |||| ||||||||| |||||||
Sbjct 49326 TGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGT 49385
Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868
||||||||||||| || |||||| |||||| | | || | | ||| || | |
Sbjct 49386 AGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAAGATGGAATACCACAGCTTCT 49445
Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| | ||| |||| ||| | ||||| |||||| |||| ||||||
Sbjct 49446 GAGCGCGAATGGTCTTGCG-GCCACGTCCCTCCTTCTCGTACTTCTCATACAAAGCCTCG 49504
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
||||| ||| || || | ||||| ||||| || | ||||||||||| |||
Sbjct 49505 AACTCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTG--GGGCACATGAGCGTCC 49562
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| || | | || || | || ||||||||| ||||| |||||||| || |||| |
Sbjct 49563 AGTCCAAGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACA 49622
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
||| | | | ||| ||| ||| |||||| | || || | || |||||||
Sbjct 49623 AGTCACGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGA 49682
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| ||||||||||||| | ||||| || | ||| || || |||||||| || ||||
Sbjct 49683 CGTCAGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCT 49742
Query 245166 GGTCCACCATCCTCTCG-AGCGC-GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223
| || || || ||| | || | |||||| | || || | || | || ||||||||
Sbjct 49743 GATCGAC-ATA-TCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGA 49800
Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCC 245283
| ||||||||||| ||||| | ||| || | | || | | || | || |||
Sbjct 49801 GGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCC 49860
Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343
| || || || |||||| || | ||| || |||| | ||||| || |||||
Sbjct 49861 GATACCACCAGCCATCTTGGAAATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTC 49920
Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403
|||||||| |||||||| || || ||||| ||||||||||||| || ||| | |
Sbjct 49921 GATGCTGTCATCCTTCATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACC 49980
Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
| ||||||||| |||||| ||| ||||| |||
Sbjct 49981 GGCGTTGAACAGGGTGGGGGAGGCATGGGTGAAG 50014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944326758331040
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