Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq160 241 2e-58
seq1011 136 5e-27
>seq160
Length=70483
Score = 241 bits (266), Expect = 2e-58
Identities = 1173/1843 (64%), Gaps = 51/1843 (3%)
Strand=Plus/Plus
Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617
|||| | |||| ||||| || ||| ||||| | || ||||||||||| || |||
Sbjct 48344 TCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 48403
Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677
||||| || |||||||| || | ||||| || | |||| | ||| ||
Sbjct 48404 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGGTCC 48463
Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737
| |||| || ||||| ||||| ||||| ||||| |||||||| ||||||||
Sbjct 48464 TTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCCGCCATC 48523
Query 113738 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATC 113793
| | || || || ||| | ||||| || || |||| ||| ||| |||||
Sbjct 48524 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATC 48579
Query 113794 ATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCAT 113853
|| ||||| | ||| || || |||||||| | | | || | | ||||||
Sbjct 48580 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 48639
Query 113854 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 113910
| | |||||||| || | | || |||| |||| || ||||||||
Sbjct 48640 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 48696
Query 113911 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 113970
||||| || || ||| |||| | | ||||| |||| ||||| ||||| |||||
Sbjct 48697 CTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCA 48756
Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030
||| ||||| |||| || |||| || ||| || ||||| || || | ||| | |||
Sbjct 48757 CTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCT 48816
Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGC 114088
||| || ||| | ||| | || | |||||||| | |||||| || | | | ||
Sbjct 48817 GTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGA 48876
Query 114089 TTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCA 114148
| || | | |||||| || || |||||||| || | ||| || || |||||||
Sbjct 48877 G--GGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTG 48934
Query 114149 AATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGA 114208
|||| || || || ||||| |||| || | || ||||| ||||| |||||
Sbjct 48935 AATGATTCATAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCTAGGGCCGCGTGG 48994
Query 114209 TACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGT 114268
|| ||||||||||| || | |||| | |||||| || ||||| | | |
Sbjct 48995 TAGATTGTCTCAAAGATCTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAA-GGGCAT 49053
Query 114269 CGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 114327
||| | || || | || || ||||| |||||||| | ||||| || || || |
Sbjct 49054 GCGCAGAGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCG 49113
Query 114328 CATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 114387
||| || || || || || || || || || ||| || | | | || ||
Sbjct 49114 CATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGGTTGACATCAATGATCTTGTTAAG 49173
Query 114388 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447
|| | || ||||| || | |||||| ||||| | | || | | || |
Sbjct 49174 GTTGCGGACAACCACCTTAGTAACTTCATGGAGCTTCTTAAAGTCGTAGCAGCCTTCGTT 49233
Query 114448 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507
| | |||||| ||| ||||| | || ||||| || || |||| ||| ||
Sbjct 49234 GTAGTCGACATAAGCAGGGAGGGCCAAAGAGGCCAGGTTGCAAACAGCAACCTCGTCTGG 49293
Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567
|| |||||| || || || || || | || || || ||||| |||| ||||||
Sbjct 49294 GGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTT 49353
Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627
|| || ||| ||| || ||||||||||| |||||| | || | || ||||| ||
Sbjct 49354 CTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGT 49413
Query 114628 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTG-GCAC-AGTGGCGTT---GGCT 114682
|||| || | || | | ||| | || ||| || | | ||| || | |
Sbjct 49414 CTGGGCCTCCAAGATGGAATACCA-----CAGCTTCTGAGCGCGAATGGTCTTGCGGCCA 49468
Query 114683 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAG 114742
|| ||||||| ||||||||| || | || || ||||| || || | || |
Sbjct 49469 CGTCCCTCCTTCTCGTACTTCTCATACAAAGCCTCGAACTCCTCGCCATAGCAGTCAGCA 49528
Query 114743 AGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGC 114799
|| || || || || | ||||| | ||| | ||| | ||| || ||||||||||
Sbjct 49529 AGGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAACACGC 49585
Query 114800 TTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCA 114859
||||||||||| || || ||||||||||| ||| | || ||| ||| | |||||
Sbjct 49586 TTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGAGCGCGGACCTCTTCC 49645
Query 114860 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 114919
| || || || || | || | || || | || || |||||||| || || |||
Sbjct 49646 TTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCAGCGTGCCAGGGCTCGAGG 49705
Query 114920 TACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTG 114973
|| | || | | || | |||| |||| |||| | ||||| || || |||
Sbjct 49706 TAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTG 49762
Query 114974 GCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATA 115033
|| || || |||||||| ||||| ||||| | ||| || || || || |||
Sbjct 49763 TTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATG 49822
Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093
||| |||| | || |||| || || || ||||| || ||| ||| ||
Sbjct 49823 TAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATCTTGGAA 49882
Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153
|| || ||| | | ||| || | ||||| || ||||| |||| |||| | ||
Sbjct 49883 ATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTCGATGCTGTCATCCTTCATGTCG 49942
Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGT 115212
| | |||||| |||| || ||||| || ||||| |||||||| ||||| || |
Sbjct 49943 ACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTGAACAGGGTGGGGGA 50001
Query 115213 CGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATG 115270
|| ||| ||| | | |||| ||||| | ||| ||||||| ||| ||||
Sbjct 50002 GGCATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATG 50059
Query 115271 TCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGG 115330
|| || || ||||| | || || ||||| | ||||| || ||| || | |
Sbjct 50060 TCATCTCCCCAGATACCAACAGACACTCGCATGATCATGTGCTGTGGTCGCTCAACAATC 50119
Query 115331 ATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373
| ||||| ||| || ||||||| |||||| |||||||
Sbjct 50120 TTGCCATCAAGCTTCAGGAGGTATGATCGCTCCAAAGTCTTGA 50162
>seq1011
Length=119094
Score = 136 bits (150), Expect = 5e-27
Identities = 350/525 (67%), Gaps = 15/525 (3%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| |||||||||||||| |||||||| || || || ||| ||| ||
Sbjct 29509 GGCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 29450
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | ||| | ||| |||||||||
Sbjct 29449 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 29390
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222
||||| || || || |||| || |||| |||||||| || || ||||
Sbjct 29389 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 29333
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282
| |||||| || ||||| | ||||| || || || || | ||||| || || |
Sbjct 29332 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 29273
Query 126283 AAAGA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340
|||| || || | | ||| | || |||||||| | || ||||| || ||
Sbjct 29272 GAAGAGGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 29215
Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399
|| ||| ||||| | | ||| || | ||| | ||||||| | || || |||
Sbjct 29214 GTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 29156
Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459
||||| ||||| || || | | ||||| ||||| ||||| || |
Sbjct 29155 GATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGC 29096
Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516
||||| || |||||||| | ||||| | || || | ||||||| || | ||
Sbjct 29095 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 29036
Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||||| |||||||| || ||||| | ||| || || |||||
Sbjct 29035 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 28991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597345729866320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |