Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq160 295 7e-75
>seq160
Length=70483
Score = 295 bits (326), Expect = 7e-75
Identities = 1082/1673 (65%), Gaps = 40/1673 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| ||||| || |||||||| ||| | ||||||
Sbjct 50181 AACTACCAATACTTCGGCTTCAAGACTTTGGAGCGATCATACCTCCTGAAGCTTGATGGC 50122
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||||| || || || | ||||| || | | || || || |
Sbjct 50121 AAGATTGTTGAGCGACCACAGCACATGATCATGCGAGTGTCTGTTGGTATCTGGGGAGAT 50062
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| | ||| || | | | || |||| |||| | ||| |||
Sbjct 50061 GACATTGAGCGTGTCCTGGAGACATACAACCTCATGTCTAGCAAGTTCTTCACCCATGCC 50002
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| |||||||||||||| || |||||| | | ||| |||| || || ||| || |
Sbjct 50001 TCCCCCACCCTGTTCAACGCCGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTC 49942
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| |||| || || | |||| || ||| ||||| | ||
Sbjct 49941 GAC-ATGAAGGATGACAGCATCGAGGGTATCTATGACACTCTGAAGACGTGTGCCATGAT 49883
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
|| || || || || ||||| | | |||||| | | ||||||| || || ||
Sbjct 49882 TTCCAAGATGGCTGGTGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTA 49823
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| || ||||| || ||||| ||||| | | || ||||| || || ||||||||
Sbjct 49822 CATTGCTGGCACCAACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAA 49763
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || | || || || ||||||||| | | | ||| | || || |||| ||
Sbjct 49762 CACTGCCAGATATGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCT 49703
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||||||||||||| ||||| | ||| | || || || |||||||||||||| ||
Sbjct 49702 CGAGCCCTGGCACGCTGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGA 49643
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | || | ||| | ||| ||||||||| | || || || || ||||| ||
Sbjct 49642 AGAGGTCCGCGCTCGTGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCG 49583
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| ||||| |||| | ||||| || | || ||||| ||||| || || || | ||
Sbjct 49582 TGTTGAGAAGAACTTGGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGCCTTGCTGA 49523
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCA 94432
| | ||| | || || | ||||||| ||||| | |||| | ||||
Sbjct 49522 CTGCTATGGCGAGGAGTTCGAGGCTTTGTATGAGAAGTACGAGAAGGAGGGACGTGGCC- 49464
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| ||| || ||| |||||||||| || ||| |||| | ||| ||||| |
Sbjct 49463 GCAAGACCATTCGCGCTCAGAAGCTGTGGTATTCCATCTTGGAGGCCCAGACCGAGACTG 49404
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
||| |||| ||| | | |||||| | |||| |||| ||||||| || |||| |
Sbjct 49403 GTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 49344
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||| ||||| || || ||||||||||| ||||||| | | || ||||||
Sbjct 49343 GAACCATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTGTGCCCCAGACGAGG 49284
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672
||||||| || ||||||| ||| | ||| | ||| || ||| |||||
Sbjct 49283 TTGCTGTTTGCAACCTGGCCTCTTTGGCCCTCCCTGCTTATGT-CGA-----CTACA--A 49232
Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731
| | ||| | | ||| | || |||| |||| || | || | ||| |||
Sbjct 49231 CGAAGGCTGC-TACGACTTTAAGAAGCTCCATGAAGTTACTAAGGTGG-TTGTCCGCAAC 49174
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791
|| |||| | | || || ||| |||||| |||| |||||| ||| ||| ||
Sbjct 49173 CTTAACAAGATCATTGATGTCAACCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATG 49114
Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851
|| || ||||| || | || ||||||||| | || ||||| | | ||||
Sbjct 49113 CGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCTCTGCGC 49054
Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911
|||||| || ||| ||| || | |||| | | || || || | || ||
Sbjct 49053 ATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAGATCTTTGAGACAATCTAC 48994
Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
||| |||| | | || | | | |||| || | || || | |||||
Sbjct 48993 CACGCGGCCCTAGAGGCTTCTATGGAGATCGCCA---AGGTGGAGGGTCCCTATGAATCA 48937
Query 94972 TTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGC 95029
||| ||||| || || | | ||||||| | || |||||| | |||| ||| ||||
Sbjct 48936 TTCAAGGGATCACC--TGCATCCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAAGC 48879
Query 95030 CCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAA 95087
|||| | |||| || ||||| |||| | | || || | | | |||||| |
Sbjct 48878 CCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGCAGA--TCAAGGAGCACGGTACGCG 48821
Query 95088 AAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAA 95147
||| |||| | ||||| ||||| || ||| ||| | ||||| || ||||||||
Sbjct 48820 CAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAA 48761
Query 95148 CGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207
||||| ||||| |||| |||||||||| | ||| | | || || || ||||| || ||
Sbjct 48760 CGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTT 48701
Query 95208 CCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGG-GTGT-GTGGGGTGA 95264
|| || ||||| || || |||||| | || | | || | | || | ||
Sbjct 48700 CCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGATGC 48641
Query 95265 CAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320
|| | ||||||| | |||| | ||||||||| | ||||||||||| | |
Sbjct 48640 CA---TGAAGAACCGTATCATTGCT----GAGAACGGCTCCATTCAGAACATCCCCAACA 48588
Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
| || || || |||||||| || ||||||||||| |||||||| | ||||||
Sbjct 48587 TCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGC 48535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494716682021840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |