Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq160 233 2e-56
seq1011 116 4e-21
>seq160
Length=70483
Score = 233 bits (258), Expect = 2e-56
Identities = 932/1439 (65%), Gaps = 41/1439 (3%)
Strand=Plus/Plus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||||| | ||||| || || ||| | || | | |||||||| | ||||||||
Sbjct 48688 GTTGACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 48747
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| ||||| || || || |||| || || | || ||| |||||||| || || |
Sbjct 48748 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAG 48807
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
| | ||||| || ||| | |||||||| | |||||||| ||||| || |
Sbjct 48808 GAGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCA 48867
Query 106075 --GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132
| | || || || || | ||||||| || ||||| || | || | ||| | ||
Sbjct 48868 CAGGTCAGAG-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGT 48925
Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAG 106191
|| |||| |||| ||||||| ||| | | | || | || | || ||||| ||
Sbjct 48926 GATCCCTTGAATGATTCATAGGGACCCTCCACCTTGGCGATCTCCATAGAA-GCCTCTAG 48984
Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251
|| ||||| || || || |||||||| | |||| ||| || || || ||
Sbjct 48985 GGCCGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCACGAGCCTCGGGAGACTC 49044
Query 106252 AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310
||| | ||| || | || || | || || ||||| || ||||| | |||||| |
Sbjct 49045 AAAGGGCATGCG-CAGAGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGG 49103
Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 106370
||| ||| ||||| || || || || || || || || || |||||||
Sbjct 49104 GTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGGTTGACATCAATGA 49163
Query 106371 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAG 106430
||| || || | ||| | ||| || | |||||| || || | | | || |
Sbjct 49164 TCTTGTTAAGGTTGCGGACAACCACCTTAGTAACTTCATGGAGCTTCTTAAAGTCGTAGC 49223
Query 106431 TGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCG 106490
|| | | | |||||| || ||||| | || |||| |||||||||||
Sbjct 49224 AGCCTTCGTTGTAGTCGACATAAGCAGGGAGGGCCAAAGAGGCCAGGTTGCAAACAGCAA 49283
Query 106491 TCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCC 106550
||| || | |||||| | || || || || | |||||| || || || |
Sbjct 49284 CCTCGTCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTC 49343
Query 106551 CCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCC 106610
||| ||||| ||||| ||||| |||||| |||||||||||||||||| |||| | |
Sbjct 49344 CCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTAC 49403
Query 106611 CCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCG 106669
| ||||| ||||| | || | || | | ||||| | || | | | |||||
Sbjct 49404 CAGTCTCGGTCTGGGCCTCCAAGATGGAATACCACAGCTTCTGAGCGCG----AATGGTC 49459
Query 106670 TT--GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 106726
|| |||| ||||||||| ||||||||| || | || || |||||||| |||
Sbjct 49460 TTGCGGCCACGTCCCTCCTTCTCGTACTTCTCATACAAAGCCTCGAACTCCTC-GCCATA 49518
Query 106727 GC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCA--CCCTC 106782
|| ||| | || || || || || || || || | || | ||| | ||| ||
Sbjct 49519 GCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTT 49575
Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTACACC 106841
|||||| ||||||||||| || || |||||||| || | | | || || || | | |
Sbjct 49576 CTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAG-TCACGAGCGC 49634
Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901
| ||||||| | || ||||| || | ||||||||||| | || || |||||||
Sbjct 49635 GGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCAGCGTGCC 49694
Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955
| ||||| || |||| || | | || ||||| ||| | |||| ||||
Sbjct 49695 AGGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACAT 49751
Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015
| | || ||| ||| || || |||||||| ||||||||||| | || ||| || |
Sbjct 49752 ATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGG 49811
Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075
| || ||| ||| |||| | | |||| || || || ||||| ||||
Sbjct 49812 TGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAG 49871
Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135
|| ||| || || |||||| | | ||||| |||||||||| | ||| ||| |
Sbjct 49872 CCATCTTGGAAATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTCGATGCTGTCAT 49931
Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAG 107194
|||| || ||| | |||||| ||||| ||| || || || ||||| || |||||
Sbjct 49932 CCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTGAAC 49990
Query 107195 AGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGA 107252
||||| || | || || ||| | | |||| ||||| || ||||||||||| ||
Sbjct 49991 AGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGA 50048
Query 107253 CAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311
|| |||||||| || || ||| || | | ||| ||||| | ||||| || |||
Sbjct 50049 CACGCTCAATGTCATCTCCCCAGATACCAACAGACACTCGCATGATCATGTGCTGTGGT 50107
>seq1011
Length=119094
Score = 116 bits (128), Expect = 4e-21
Identities = 348/526 (66%), Gaps = 17/526 (3%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| |||||||| || || || || || || || || ||| || ||
Sbjct 29509 GGCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 29450
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | ||| | || | | || | ||| |||||||||
Sbjct 29449 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 29390
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449
|||||| || ||||| |||| ||||||| ||| ||||| ||| || ||||
Sbjct 29389 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 29333
Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509
| ||| || || ||||| | |||||||| ||| || || | || | ||||| |
Sbjct 29332 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 29273
Query 117510 AAATAACT-GCTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 117567
|| | | ||| | | | | || ||||| ||||| |||| || | || ||
Sbjct 29272 GAAGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 29215
Query 117568 GTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 117626
|| ||| || | | | ||| ||| | || | ||||||| | || || |||
Sbjct 29214 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGG 29156
Query 117627 TATCTGCACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACC 117685
||||| || || |||| || | | | ||||| ||||| ||||| ||
Sbjct 29155 GATCTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGG 29097
Query 117686 CAGCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCT 117742
| |||||||| |||||||||| ||||| | ||| || | || |||| || | |
Sbjct 29096 CGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 29037
Query 117743 TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||||||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 29036 TCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 28991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589973027002960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |