Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq160 367 2e-96
seq1011 181 2e-40
>seq160
Length=70483
Score = 367 bits (406), Expect = 2e-96
Identities = 1143/1743 (66%), Gaps = 86/1743 (5%)
Strand=Plus/Plus
Query 212568 GGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCC 212624
||| |||| || |||| || || || ||||||||||||||||| || || ||| |
Sbjct 48362 GGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTGAGACCAAGCTT---C 48418
Query 212625 CAGCC-GTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTG 212683
||||| ||| | |||||| |||| | | ||| | ||| ||| | || ||
Sbjct 48419 CAGCCAGTGAA-GTGCAT-GCTGGTAAT--CTTGCCC-----ATTGTGGGGTCCTTCATG 48469
Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743
|| | |||||||||||| ||| || ||||| | | | ||||| |||||
Sbjct 48470 -------TGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCCGCCAT 48522
Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803
| | || | | ||| || | |||||| ||||||||| | | | |||| || ||
Sbjct 48523 CTGGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTC 48582
Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCAT 212860
|||| | |||||||||||| | || || | | ||| | | | | |||
Sbjct 48583 GGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTT---CAT 48639
Query 212861 GTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTG 212920
| | ||| ||||||||| || ||||| ||||| || |||||||| | |||
Sbjct 48640 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTG 48699
Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980
||| || || | || || | | |||||| | ||| || ||||||||||||| || |||
Sbjct 48700 GAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTC 48759
Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040
|||||| ||||||||||| | || ||||| || ||||| || || | || | |||||
Sbjct 48760 GTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTT 48819
Query 213041 CCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG 213100
| | |||||||| ||| | | ||| ||||||| || ||| |||
Sbjct 48820 GCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCG------AGTCCCA-CTCCCA--CAG 48870
Query 213101 GTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCC 213160
||| | ||| || | ||||||||| || || | |||||| | | | || ||
Sbjct 48871 GTCAGAGGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCC 48930
Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGC 213220
|| | | || ||||| || | | ||||||| | ||| || |||| ||||| ||
Sbjct 48931 CTTGAATGATTCATAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCTAGGGCCGC 48990
Query 213221 GTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGG 213280
|| |||||| || ||||| |||| | |||| |||| ||||| || ||| |||||
Sbjct 48991 GTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGG 49050
Query 213281 CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTG 213340
||| || |||| | || || || |||||||| || | || ||||||| |||
Sbjct 49051 CATGCGCAGAGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTG 49110
Query 213341 TCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400
| || ||| ||| | ||||| | ||||| |||| || |||||||||||
Sbjct 49111 GCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGGTTGACATCAATGATCTTGTT 49170
Query 213401 GAGGTTGCGGGTGGCCACTTTGGTGAC---ATGGGCCAGGTACTCGTGATTGAACACGTA 213457
||||||||| |||| || || || |||| || | || | || ||||
Sbjct 49171 AAGGTTGCGGACAACCACCTTAGTAACTTCATGG---AGCTTCT------TAAAGTCGTA 49221
Query 213458 GCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC 213511
|| || || | ||| | |||| ||||| | ||||||||||||||| ||
Sbjct 49222 GCAGCCTTCGTTGTAGTCGACATAAGCAGGGAGGGCCAAAGAGGCCAGGTTGCAAACAGC 49281
Query 213512 CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGT 213571
||||| | | | | |||||| |||||||||||||| |||||| || ||||||||
Sbjct 49282 AACCTCGTCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGT 49341
Query 213572 GCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGAGCATGTAGGGGG 213630
|||||||||| ||||| ||| ||| | |||| |||||||||||||||| |||||
Sbjct 49342 TCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGT 49400
Query 213631 ACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCC 213690
|| ||||| ||||| | ||| || ||| || | | || | |
Sbjct 49401 TACCAGTCTCGGTCTGGGCCTCCAAGATGGAATACCACAGCTTCTGAGCGCGAATGGTCT 49460
Query 213691 GCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCC 213750
| | || ||| | | |||||||| || || | | | ||| || | |||
Sbjct 49461 TGCGGCCACGTCCCTCCTT---CTCGTACTTCTCATACAAAGCCTCGAACTCCTCGCCAT 49517
Query 213751 AGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACATGAGGCTCCAGTCCCCGT- 213804
|| | ||| || | || |||| || || || |||||||| |||||||| ||
Sbjct 49518 AG---CAGTC-AG-CAAGGCCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTT 49572
Query 213805 CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGG 213864
| |||| || | || |||||| || || || | ||| || || ||||| ||| | |
Sbjct 49573 CTTCTCA-ACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGAG 49631
Query 213865 TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGT 213924
| ||| ||| || ||| ||||| ||||| || || ||||||| ||| ||||
Sbjct 49632 CGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCAGCGT 49691
Query 213925 GCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCA 213981
|||| ||||| | ||||||||||||||| || || | |||| || ||||| || ||
Sbjct 49692 GCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACAT 49751
Query 213982 GCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGG 214041
||||| ||||||| | || || | ||| | | ||||| || |||||||
Sbjct 49752 ATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGG 49811
Query 214042 TTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG----AGCCCTATGCCA 214097
| || || || || ||||||| ||| | || ||| |||| | || || |||
Sbjct 49812 TGCCAGCAATGTAAGAGCCGGTGGCAC---GGATGCGG-TGGACGTTCAAGCCGATACCA 49867
Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157
|| || |||||| |||||||| || | ||| ||| || ||| || | ||||||
Sbjct 49868 CCAGCCATCTTGGAAATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTCGATGCTG 49927
Query 214158 TCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTT 214216
||||| | | || | ||||||||| || |||| ||||||| | | || | |||
Sbjct 49928 TCATCCTTCATGTCGACCAAGAAGCATGAGGACAGCT-GGGCCTGCGGGGTACCGGCGTT 49986
Query 214217 GAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAG 214276
||| || |||||| ||||||| | | |||||| |||| | ||| |||| ||||||||
Sbjct 49987 GAACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTAGACATGAGGTTGTATGTCTCCAG 50046
Query 214277 GAC 214279
|||
Sbjct 50047 GAC 50049
>seq1011
Length=119094
Score = 181 bits (200), Expect = 2e-40
Identities = 552/846 (65%), Gaps = 18/846 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | |||||||||||||| ||||| || | | || ||||||||
Sbjct 29800 CTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTC 29741
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| |||||||||| | || || | | | || ||| | | ||||
Sbjct 29740 CATGAAGTCAAAGGGGTTGGCAGACTTGTAGATCT-TCTCGTTGCCGAGAGCGACAAGCA 29682
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || || || |||||||||| | ||| ||| || ||||||||| | ||||
Sbjct 29681 GACGGTCGGCAACAAACTCGATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGG 29622
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | ||||| || | || |||| ||| || | || || || | || |
Sbjct 29621 CGCAGGGGAGAGCCTCGGTCAAGAATTCCTGCTCAATTCGGACAGCATCGGTGATGATGT 29562
Query 48078 ----GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
| | | | | || | |||| ||| ||||| | | |||| ||||
Sbjct 29561 CACGGATCACCTCCTTGCTGGCACGGTTC-TTG---AGGTGAGAG---TGCAGCAGGCAG 29509
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|||||||| |||||| || ||||| || ||||||| ||||||| ||| ||||||
Sbjct 29508 GCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCA 29449
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||||| || | || ||||||||||| || | || || | || |||||||||
Sbjct 29448 GGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATA 29389
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || || || || || || | || | || |||| ||||||||| ||||
Sbjct 29388 CCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATC 29329
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| | |||||||| |||||||| ||||| || || ||||| ||||| ||||
Sbjct 29328 CACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAG 29269
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | ||| || | ||| | ||||| || ||| | ||| ||||
Sbjct 29268 AGGTAGCTGCGCTGGCTGTTCTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGTCTCG 29209
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | ||||| | |||
Sbjct 29208 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGG 29149
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | ||| | ||| | ||| ||||| ||||| || ||||| || || ||||||
Sbjct 29148 ACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAG 29089
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGCC 48609
||||| |||| || | ||| | ||||| | | | || || |||||| |
Sbjct 29088 AAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTCCAGTC 29030
Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTT 48669
|| | || ||| ||| || | ||||| | ||||||||||| || || || ||
Sbjct 29029 GTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTT 28970
Query 48670 GTACAT 48675
||||||
Sbjct 28969 GTACAT 28964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931520527055360
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