Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq160 228 1e-54
seq1011 116 4e-21
>seq160
Length=70483
Score = 228 bits (252), Expect = 1e-54
Identities = 1050/1638 (64%), Gaps = 47/1638 (3%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| ||||| ||||||| || | | || ||| || || |||||||| ||||
Sbjct 50106 CCACAGCACATGATCATGCGAGTGTCTGTTGGTATCTGGGGAGATGACATTGAGCGTGTC 50047
Query 75272 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
||||||||||| || ||||| |||| | |||| || || | || ||||| |
Sbjct 50046 CTGGAGACATACAACCTCATGTCTAGCAAG--TTCTTCACCCATGCCTCCCCCACCCTGT 49989
Query 75330 TCAATGCTGGTACACC-AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||| || ||||| || || || ||| ||||| |||||| | ||| || |||||
Sbjct 49988 TCAACGCCGGTACCCCGCAGGCC-CAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGAT 49930
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| ||| | |||||||||| ||||| | | |||||| || || ||| ||||
Sbjct 49929 GACAGCATCGAGGGTATCTATGACACTCTGAAGACGTGTGCCATGATTTCCAAGATGGCT 49870
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| ||||| || || || |||| | | |||| ||| ||| || ||
Sbjct 49869 GGTGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACC 49810
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| ||| || | ||||||||||| |||||||| || || ||| ||| || | |||
Sbjct 49809 AACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATAT 49750
Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| |||| ||| || |||| || || | || ||||| | || || |||
Sbjct 49749 GTCGATCA---GGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 49693
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| || || || | ||||||||||| | || ||||| || | ||||||| ||
Sbjct 49692 CACGCTGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGC 49633
Query 75683 TGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG-- 75739
| | || || || | | | || |||||||| || || ||||||||||| ||||||
Sbjct 49632 GCTCGTGA-CTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAA 49574
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC-GCGG 75797
|| ||| | ||| | || | || || || || || || || || | ||| ||
Sbjct 49573 GAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTA 49517
Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857
| || |||||||| || || | || ||||| || ||||||| | | | ||
Sbjct 49516 T-GGCGAGGAGTTCGAGGCTTTGTATGAGAAGTACGAGAAGGAGGGACGTGGCCGCAAGA 49458
Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916
| | | | | | || | | ||| | | || | | | ||||| |||||||| |
Sbjct 49457 CCATTCGCG-CTCAGAAGCTGTGGTATTCCATCTTGGAGGCCCAGACCGAGACTGGTAAC 49399
Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976
|| | ||||| ||||||||||| || ||| ||||| ||||| ||||| |||||||
Sbjct 49398 CCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACC 49339
Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036
||| ||||| || || ||||| || || | |||||| | || ||| |||
Sbjct 49338 ATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTGTGCCCCAGACGAGGTTGCT 49279
Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096
|||||||| |||| || | ||||| || |||||| | | | || |
Sbjct 49278 GTTTGCAACCTGGCCTCTTTGGCCCTCCCTGCTTATGTCGACTACAACGAAGGCTGCTAC 49219
Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156
|| | | | || || |||||| | || ||| | ||| | || || ||| |||||
Sbjct 49218 GACTTTAAGAAGCTCCATGAAGTTACTAAGGTGGTTGTCCGCAACCTTAACAAGATCATT 49159
Query 76157 GACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216
|| || || || || || || || || || ||||| ||| |||| |||
Sbjct 49158 GATGTCAACCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCCATT 49099
Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTC 76275
||| | ||||| || ||||| || || | || || | || ||| | ||||| ||
Sbjct 49098 GGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCTCTG-CGCATGCCCTTTGAGTC 49040
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335
|| || ||| |||| | |||||||| || || || ||||| |||| ||
Sbjct 49039 TCCCGAGGCTCGTGAGCTGAACAAGCAGATCTTTGAGACAATCTACCACGCGGCCCTAGA 48980
Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395
||| | || | || | | | ||| ||||||| |||| |||| || || ||
Sbjct 48979 GGCTTCTATGGAGATCGCCAAGGTGGAGGGTCCCTATGAATCATTCAAGGGATCACCTGC 48920
Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGAC 76453
||| | || | || || || || ||||||| | || || || || | | | ||
Sbjct 48919 ATCCGAGGGCATCCTCCAATTCGACATGTGGG-ATGTCAAGCC-CTCTGACCTGTGGGAG 48862
Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513
||||| |||||||| | ||||||||| | ||| || ||||| | | | ||
Sbjct 48861 TGGGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTACGCGCAACAGCTTGCTCCTCGCC 48802
Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573
|| |||||||| ||| || | || || |||| || || || ||||| || || |||
Sbjct 48801 CCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTAC 48742
Query 76574 ACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC 76633
|| | |||||||||| | || | ||| || || ||||| ||||||||
Sbjct 48741 ACCTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAGGTTGTCAACCCCTGG 48682
Query 76634 CTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCA-T 76689
|| |||| ||||| | | || ||||||||| | | |||||| | | ||| |
Sbjct 48681 CTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGATGCCATGAAGAACCGTATCATT 48622
Query 76690 GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCT 76749
| ||| | | || |||||||| || ||| | | ||||| || ||||||||| ||
Sbjct 48621 GCTGAGAAC----GGCTCCATTCAGAACATCCCCAACATCCCCGAAGATATCAAGGCCCT 48566
Query 76750 CTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATCG 76806
||| || || ||||| || || || |||| | ||||| || |||||
Sbjct 48565 TTACAAGACCGTCTGGGAGATTTCTCAGCGCCAAATTGTC---CAGATGGCGGCTGATCG 48509
Query 76807 TGGTCGCTTCATTGATCA 76824
|||| |||||||||||
Sbjct 48508 TGGTGCTTTCATTGATCA 48491
>seq1011
Length=119094
Score = 116 bits (128), Expect = 4e-21
Identities = 348/526 (66%), Gaps = 17/526 (3%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
||||| || ||||| ||||| ||||||| ||||| |||||||||| | || ||||
Sbjct 28991 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 29050
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
|| | || ||| | ||||| |||||||||| |||||||| | || ||||| |||
Sbjct 29051 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 29110
Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
|| ||||| | | | || |||| || || ||||| ||| || || |
Sbjct 29111 GTCAACGAGAACCTGGTCGAGCGCTTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATG 29169
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
||||||| | || | ||| ||| | | | || ||| || || || | |
Sbjct 29170 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 29228
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAA-GAAGC-AGTTATTTGAAGCCATCCAAAC 65006
| |||| ||||| ||||| || | | | | ||| | | || | ||||| | ||
Sbjct 29229 TCGACACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 29286
Query 65007 TGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTC 65063
| || || ||| |||||||| | ||||| || || ||| | |||| || ||
Sbjct 29287 CATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTC 29346
Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123
| ||||| ||| ||||||| |||| ||||| || ||||||||||||||| |||
Sbjct 29347 T---TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGG 29403
Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183
| || | | || | ||| | |||||||| ||||||||||| || || ||| ||
Sbjct 29404 TGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTC 29463
Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229
|| || || || || || || |||||||| ||| || ||||||
Sbjct 29464 CAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGCC 29509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596561740195520
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