Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 134 1e-26
>seq1011
Length=119094
Score = 134 bits (148), Expect = 1e-26
Identities = 214/307 (70%), Gaps = 0/307 (0%)
Strand=Plus/Plus
Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410
||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| ||||
Sbjct 117977 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 118036
Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470
|||| ||| | || |||| ||| |||| | || || || ||||||||| | ||
Sbjct 118037 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 118096
Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530
|||||||| | ||| | | || || |||| | || ||||| | || ||||
Sbjct 118097 AAGTACTTGATGACATAAGAGCCTGGGCGGGCAAGAGACTGGGCGACGCTAGACAAGTTG 118156
Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590
|||| || |||||||| ||||| ||||| ||||| | ||||| | |||| |||
Sbjct 118157 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGAAGGCGCTCCATC 118216
Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCT 34650
|||||||||||||| || || |||| ||| |||||| || |||| ||| |
Sbjct 118217 TTGTAGCGGTAGAAGGCATCGCTGACATCGCGACGAACGTTGACGAGAGCCATGGTGACG 118276
Query 34651 GGTGTTA 34657
| |||||
Sbjct 118277 GTTGTTA 118283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412836296791622
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |