Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1011 134 1e-26 >seq1011 Length=119094 Score = 134 bits (148), Expect = 1e-26 Identities = 214/307 (70%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| |||| Sbjct 117977 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 118036 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || |||| ||| |||| | || || || ||||||||| | || Sbjct 118037 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 118096 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| | ||| | | || || |||| | || ||||| | || |||| Sbjct 118097 AAGTACTTGATGACATAAGAGCCTGGGCGGGCAAGAGACTGGGCGACGCTAGACAAGTTG 118156 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 |||| || |||||||| ||||| ||||| ||||| | ||||| | |||| ||| Sbjct 118157 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGAAGGCGCTCCATC 118216 Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGCT 34650 |||||||||||||| || || |||| ||| |||||| || |||| ||| | Sbjct 118217 TTGTAGCGGTAGAAGGCATCGCTGACATCGCGACGAACGTTGACGAGAGCCATGGTGACG 118276 Query 34651 GGTGTTA 34657 | ||||| Sbjct 118277 GTTGTTA 118283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412836296791622