Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq378 95.1 9e-15
>seq378
Length=193057
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTTG 29642
||||| ||| || || |||||||| || || | ||| | ||||| || || || ||
Sbjct 156615 TGAAGTGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAG-TGCGACCGTCCTCAAGCTG 156557
Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702
|| |||||| | || | | ||||||||||| ||||||||||| ||||| || ||| |
Sbjct 156556 CTTACCAGCAAAGATAAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCCTG-AATCT 156498
Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761
||| |||||| | || | ||||| || ||| || || | || || || ||||| |
Sbjct 156497 TTGACTTGACATTGTCGATGGTGTCTGATGATTCAACCTCCAATGTGATGGTCTTGCCGG 156438
Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || || ||||||||
Sbjct 156437 TCAACGTCTTGACGAAGATCTGCAT 156413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385214251618614
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |