Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq378 95.1 9e-15 >seq378 Length=193057 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATCATCGAGTTG 29642 ||||| ||| || || |||||||| || || | ||| | ||||| || || || || Sbjct 156615 TGAAGTGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAAG-TGCGACCGTCCTCAAGCTG 156557 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || |||||| | || | | ||||||||||| ||||||||||| ||||| || ||| | Sbjct 156556 CTTACCAGCAAAGATAAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCCTG-AATCT 156498 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 ||| |||||| | || | ||||| || ||| || || | || || || ||||| | Sbjct 156497 TTGACTTGACATTGTCGATGGTGTCTGATGATTCAACCTCCAATGTGATGGTCTTGCCGG 156438 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || |||||||| Sbjct 156437 TCAACGTCTTGACGAAGATCTGCAT 156413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214251618614