Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq98 89.7 4e-12
>seq98
Length=95448
Score = 89.7 bits (98), Expect = 4e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
||||| |||||||| | |||||||||||||||||| | ||| |||| || | || ||
Sbjct 26344 GAATTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTCTCATTGATACTGCCGTCAAGACA 26285
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
||||| |||||||||||||| ||| | |||||| || |||||| | || ||
Sbjct 26284 GCTGAAACTGGTTATATTCAGAGACGTTTGGTCAAGGCTCTGGAAGATCTCAACGCTCAA 26225
Query 435253 TATGATGGTACAGT 435266
||||| || || ||
Sbjct 26224 TATGACGGAACGGT 26211
Score = 87.8 bits (96), Expect = 1e-11
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
|| || || |||||| | |||| || ||||||||||||||||| || | ||||| |||
Sbjct 27784 GGAAAGGAGGGTCGTCTGCGAGGCAACTTGATGGGAAAGCGTGTTGACTTTTCTGCTCGT 27725
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
||||| || || ||| |||| | |||| | ||||| |||||||||| || ||||
Sbjct 27724 ACAGTCATCACGGGAGATGCTAACCTGTCTCTGCACGAAGTCGGTGTTCCTCGCAGTATT 27665
Query 432408 GCGAAAAATCTTACTT 432423
|| | | ||| ||||
Sbjct 27664 GCCAGGACTCTGACTT 27649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740578653054204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |