Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq98 89.7 4e-12 >seq98 Length=95448 Score = 89.7 bits (98), Expect = 4e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | |||||||||||||||||| | ||| |||| || | || || Sbjct 26344 GAATTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTCTCATTGATACTGCCGTCAAGACA 26285 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| |||||||||||||| ||| | |||||| || |||||| | || || Sbjct 26284 GCTGAAACTGGTTATATTCAGAGACGTTTGGTCAAGGCTCTGGAAGATCTCAACGCTCAA 26225 Query 435253 TATGATGGTACAGT 435266 ||||| || || || Sbjct 26224 TATGACGGAACGGT 26211 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || || || |||||| | |||| || ||||||||||||||||| || | ||||| ||| Sbjct 27784 GGAAAGGAGGGTCGTCTGCGAGGCAACTTGATGGGAAAGCGTGTTGACTTTTCTGCTCGT 27725 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 ||||| || || ||| |||| | |||| | ||||| |||||||||| || |||| Sbjct 27724 ACAGTCATCACGGGAGATGCTAACCTGTCTCTGCACGAAGTCGGTGTTCCTCGCAGTATT 27665 Query 432408 GCGAAAAATCTTACTT 432423 || | | ||| |||| Sbjct 27664 GCCAGGACTCTGACTT 27649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740578653054204