Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq378 120 6e-22
>seq378
Length=193057
Score = 120 bits (132), Expect = 6e-22
Identities = 122/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 82652 ACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTC 82711
|||||| || || || || ||||||||||| || | || ||||| ||||| || || ||
Sbjct 156571 ACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGATCCGGAGGAATACCCTC 156512
Query 82712 CTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT 82771
||| || |||||||||| || ||||| || || || || | ||| || ||||| ||
Sbjct 156511 CTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCTGATGATTCAACCTCCAATGT 156452
Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||||||| ||||||||||| || || ||||||||
Sbjct 156451 GATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 156413
Score = 102 bits (112), Expect = 2e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||||||||| |||||||| || || ||||| || || || || | | | |||
Sbjct 156856 ACGCAGAACCAAGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGACC 156797
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || || ||||||||||| | | || || || ||||| || || |||||
Sbjct 156796 GTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 156737
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| | || || || || || || || || ||| || || | || ||
Sbjct 156736 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGAT 156677
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| || || || |||||
Sbjct 156676 TGTCTTGCCGGTCAGAGTCTTAACGAAAATTTGCAT 156641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981813941037306
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |