Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq378 95.1 1e-14
>seq378
Length=193057
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGA-CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA 131967
|||| |||||| || | || || ||| || ||||||||||||||||||| ||| ||
Sbjct 156855 CGCAGAACCAAGTGCA-GTGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGACC 156797
Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027
||||| ||||| ||||| | | |||| | ||||| || || ||||| ||||| || ||
Sbjct 156796 GTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 156737
Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087
|| ||| || || | | || | || |||| | ||||| |||| || |
Sbjct 156736 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGAT 156677
Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||||||| || | |||||| |||||
Sbjct 156676 TGTCTTGCCGGTCAGAGTCTTAACGAAAATTTGCAT 156641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476604920647440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |