Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq378 95.1 1e-14 >seq378 Length=193057 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGA-CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA 131967 |||| |||||| || | || || ||| || ||||||||||||||||||| ||| || Sbjct 156855 CGCAGAACCAAGTGCA-GTGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGACC 156797 Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027 ||||| ||||| ||||| | | |||| | ||||| || || ||||| ||||| || || Sbjct 156796 GTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 156737 Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087 || ||| || || | | || | || |||| | ||||| |||| || | Sbjct 156736 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGAT 156677 Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||||||| || | |||||| ||||| Sbjct 156676 TGTCTTGCCGGTCAGAGTCTTAACGAAAATTTGCAT 156641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476604920647440