Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq155 105 8e-18 >seq155 Length=71478 Score = 105 bits (116), Expect = 8e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930 ||||| |||| |||||| || || || | | |||| || | | || | || | Sbjct 19285 AATCTCCAGCTCGGGGAATGGCCGAGGCTCGCGCTCCAGTTGTGTCTGGAGAGCGTCGAT 19226 Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 ||||| || ||||||||| ||||| |||| | ||| | | || ||| || | Sbjct 19225 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATC 19166 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 | |||||| || | ||||| |||||||| | |||||||| ||||||||||||| || Sbjct 19165 GCACACGTGAGCGAGCATGTGTGTGAGCAGAGCATAGCTGGCGATGTTGAAGGGGATGCC 19106 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||||||||| | |||| |||||| |||||||| Sbjct 19105 GAGGCCCATGTCACAAGACCGCTGGTATAGCTGGCA 19070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583480312545600