Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq160 138 2e-27
>seq160
Length=70483
Score = 138 bits (152), Expect = 2e-27
Identities = 405/613 (66%), Gaps = 16/613 (3%)
Strand=Plus/Plus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || ||||| || | ||| || ||||| ||| ||||| |||||||| || || ||
Sbjct 49336 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 49395
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| ||||||| || |||| | || | || || | ||| | | ||| ||
Sbjct 49396 GGGGTTACCAGTCTCGGTCTGGGCCTCCAAGATGGAATACCACAGCTTCTGAGCGCGAAT 49455
Query 69471 TACGGTCTTGTA---ACGCTTCTCTTTTTCATA-TTGTG-TATATAGCCGTTCGAATTCA 69525
||||||| ||| ||| || || || || | || | |||| ||||| ||
Sbjct 49456 ---GGTCTTGCGGCCACGTCCCTCCTTCTCGTACTTCTCATACAAAGCC--TCGAACTC- 49509
Query 69526 TCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583
||| ||| | || ||| | | ||||| ||||| || || ||||| | | ||| |
Sbjct 49510 -CTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCA 49568
Query 69584 CATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTC 69643
| | || ||| || ||||| || |||||||||||||| ||||| | || | || |
Sbjct 49569 AGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCAC 49628
Query 69644 TGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAG 69703
| | ||||| || || || || ||||| || ||||| | | ||||
Sbjct 49629 GAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCAG 49688
Query 69704 AATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTA 69763
||||| || || || || || || | | | || || || || || || |||||||| |
Sbjct 49689 CGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGA 49748
Query 69764 TGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCAT 69823
|||||||||||||| || | |||| ||||| ||||||||||| ||||| |||| |
Sbjct 49749 CATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGT 49808
Query 69824 TTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTC 69883
| || |||| ||| ||| || | || || || | | || || || |
Sbjct 49809 TGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCAC 49868
Query 69884 CTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTA 69942
| ||||| || || || | |||| |||| |||| |||||||| |||||||| |||||
Sbjct 49869 CAGCCATCTTGGAAATCATGGCAC-ACGTCTTCAGAGTGTCATAGATACCCTCGATGCTG 49927
Query 69943 TCATCTATCATGT 69955
||||| ||||||
Sbjct 49928 TCATCCTTCATGT 49940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686899749976560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |