Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq378 95.1 1e-14 >seq378 Length=193057 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||||||| |||| |||| || ||||| ||||| || | Sbjct 156603 TCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAG 156544 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || |||||||| |||||||| || | |||||| || || ||||| || | | Sbjct 156543 ATAAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTTTGACTTGACATTG 156484 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||||| | |||||| || | || || | ||||| |||| || || || Sbjct 156483 TCGATGGTGTCTGATGATTCAACCTCCAATGTGATGGTCTTGCCGGTCAACGTCTTGACG 156424 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 156423 AAGATCTGCATA 156412 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| ||||||||||||| | |||| ||||||| ||||| ||||| || | Sbjct 156831 TCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAG 156772 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | ||||| || || || || | ||||| || || |||||| || | | | Sbjct 156771 ATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 156712 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||| || || || || || | ||||| |||||||| || || Sbjct 156711 TCGATGGTGTCGGAAGATTCCACCTCGAGGGTGATTGTCTTGCCGGTCAGAGTCTTAACG 156652 Query 27237 AAGATTTGCATA 27248 || ||||||||| Sbjct 156651 AAAATTTGCATA 156640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424928941452048