Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq378 82.4 7e-11
>seq378
Length=193057
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTCATC 39134
||||| || || |||||||| || || || || || ||| |||| || || |||| ||
Sbjct 156849 ACCAAGTGCAGTGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAAG-GTGCGACCGTCTTC 156791
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||| || || ||||| || | ||||||||||| | || | || ||| ||||||
Sbjct 156790 CAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 156731
Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| || |||| ||| | | | || ||| || ||||| || | ||||| | |
Sbjct 156730 AATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGATTGTCT 156672
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || ||||| || ||||| || ||||||||
Sbjct 156671 TGCCGGTCAGAGTCTTAACGAAAATTTGCAT 156641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429540082218302
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |