Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq155 107 2e-18
>seq155
Length=71478
Score = 107 bits (118), Expect = 2e-18
Identities = 198/288 (69%), Gaps = 3/288 (1%)
Strand=Plus/Minus
Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589
||| ||||||||||||| | ||| ||||| |||| || | || | ||| | |
Sbjct 19357 GTGGGGGTCGTAGCCCTTGACCACGAAGTCCTCGACCTTCCAGCCATCGATGCTGCCGCC 19298
Query 29590 C--CTCCTGTTTATCCTC-AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCT 29646
| |||| | || ||| || ||| || || | ||||| | ||| || || ||
Sbjct 19297 CTTCTCCCGCGTAATCTCCAGCTCGGGGAATGGCCGAGGCTCGCGCTCCAGTTGTGTCTG 19238
Query 29647 CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCC 29706
|| | || | |||||| | ||||||||| || ||||||| | |||| | |||
Sbjct 19237 GAGAGCGTCGATGTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCC 19178
Query 29707 CGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 29766
|| | || || |||||||| | ||||| ||||| |||| ||||||||||||||
Sbjct 19177 GGGCACCAGATCGCACACGTGAGCGAGCATGTGTGTGAGCAGAGCATAGCTGGCGATGTT 19118
Query 29767 AAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814
||||| | ||||| |||||||| | |||| |||||| ||||||||
Sbjct 19117 GAAGGGGATGCCGAGGCCCATGTCACAAGACCGCTGGTATAGCTGGCA 19070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406157982579844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |