Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq7 120 3e-22
>seq7
Length=2761852
Score = 120 bits (132), Expect = 3e-22
Identities = 293/439 (67%), Gaps = 4/439 (1%)
Strand=Plus/Minus
Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044
|||||||| | ||| || ||||| ||||| |||| |||||||| || || |||
Sbjct 1551353 CCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCCCGCTTC 1551294
Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104
|| | ||| || || | ||| || | || ||||| ||||||||||||| |||||
Sbjct 1551293 TTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCGGCAAAG 1551234
Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164
|| | | || | ||| | | | || |||| | |||||| |||| ||
Sbjct 1551233 GCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGATCCATCGGATAGCCCAGTCA 1551174
Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT-CTCTTTTTCCT 17222
|| || |||| |||||| || || || || || || || | | || | ||
Sbjct 1551173 GCCTTCTTGCGG-ATGCAAGGAATGGTCTCAATCGCGTTGAAGAGGTAGCTGCGCTGGCT 1551115
Query 17223 GTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282
|| | || | || || || |||||||| || |||| | |||||||||||||||||||
Sbjct 1551114 GT-GCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTCTCGGAGTGTATGTTCTCCA 1551056
Query 17283 TGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATC 17342
| ||||| || ||||| ||||| || || || | || || || || || ||| |
Sbjct 1551055 TCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCTCGCCGCTGAAGC 1550996
Query 17343 GTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCT 17402
| || | || || ||||| ||||||||||| |||||||| || |||| || ||
Sbjct 1550995 GCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGAG 1550936
Query 17403 TAATGAAATATTTTTCGTC 17421
||||| || || |||||
Sbjct 1550935 AGATGAAGTACTTCTCGTC 1550917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545515898840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |