Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7 120 3e-22 >seq7 Length=2761852 Score = 120 bits (132), Expect = 3e-22 Identities = 293/439 (67%), Gaps = 4/439 (1%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| ||||| |||| |||||||| || || ||| Sbjct 1551353 CCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCCCGCTTC 1551294 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | ||| || | || ||||| ||||||||||||| ||||| Sbjct 1551293 TTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCGGCAAAG 1551234 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || | | || | ||| | | | || |||| | |||||| |||| || Sbjct 1551233 GCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGATCCATCGGATAGCCCAGTCA 1551174 Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT-CTCTTTTTCCT 17222 || || |||| |||||| || || || || || || || | | || | || Sbjct 1551173 GCCTTCTTGCGG-ATGCAAGGAATGGTCTCAATCGCGTTGAAGAGGTAGCTGCGCTGGCT 1551115 Query 17223 GTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282 || | || | || || || |||||||| || |||| | ||||||||||||||||||| Sbjct 1551114 GT-GCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTCTCGGAGTGTATGTTCTCCA 1551056 Query 17283 TGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATC 17342 | ||||| || ||||| ||||| || || || | || || || || || ||| | Sbjct 1551055 TCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCTCGCCGCTGAAGC 1550996 Query 17343 GTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCT 17402 | || | || || ||||| ||||||||||| |||||||| || |||| || || Sbjct 1550995 GCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGAG 1550936 Query 17403 TAATGAAATATTTTTCGTC 17421 ||||| || || ||||| Sbjct 1550935 AGATGAAGTACTTCTCGTC 1550917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545515898840