Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq7 91.5 2e-13
>seq7
Length=2761852
Score = 91.5 bits (100), Expect = 2e-13
Identities = 179/264 (68%), Gaps = 3/264 (1%)
Strand=Plus/Minus
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
|||| | || |||||||||||||| || ||||| || || |||||||| ||||||||
Sbjct 1551081 GTACGTCTCGGAGTGTATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTC 1551022
Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614
| || || || || || || || || |||||||||| || ||||| |||||
Sbjct 1551021 GGGAATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGA 1550962
Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAAT 16671
|| || || || |||| ||||| ||||| || || |||||| | | | |
Sbjct 1550961 GGCGGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTT 1550902
Query 16672 ATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCAC 16731
| ||| || | | || ||||| | || | || || | ||||| ||| |||| |
Sbjct 1550901 GTTCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGAAGCCTC 1550842
Query 16732 TGCCTTTTTATACATTTTCCAAAT 16755
||||| || ||||||| ||| ||
Sbjct 1550841 GGCCTTCTTGTACATTTGCCAGAT 1550818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414316895160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |