Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 2e-13 >seq7 Length=2761852 Score = 91.5 bits (100), Expect = 2e-13 Identities = 179/264 (68%), Gaps = 3/264 (1%) Strand=Plus/Minus Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 |||| | || |||||||||||||| || ||||| || || |||||||| |||||||| Sbjct 1551081 GTACGTCTCGGAGTGTATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTC 1551022 Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | || || || || || || || || |||||||||| || ||||| ||||| Sbjct 1551021 GGGAATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGA 1550962 Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA---GAAT 16671 || || || || |||| ||||| ||||| || || |||||| | | | | Sbjct 1550961 GGCGGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTT 1550902 Query 16672 ATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCAC 16731 | ||| || | | || ||||| | || | || || | ||||| ||| |||| | Sbjct 1550901 GTTCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGAAGCCTC 1550842 Query 16732 TGCCTTTTTATACATTTTCCAAAT 16755 ||||| || ||||||| ||| || Sbjct 1550841 GGCCTTCTTGTACATTTGCCAGAT 1550818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414316895160