Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq2 221 1e-52
>seq2
Length=5759010
Score = 221 bits (244), Expect = 1e-52
Identities = 538/821 (66%), Gaps = 82/821 (10%)
Strand=Plus/Minus
Query 145518 CTTCCCCTCTCCC--CCCAATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGG 145575
||||| ||||| | ||| |||||| | ||| | ||||||||| | |||||||
Sbjct 4488465 CTTCCTCTCTCACAGCCCGGTTAGACGGACATGTTCATGGGGATCGATTTATGGGGGTCA 4488406
Query 145576 TAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG 145635
|| |||| | |||||||||| || | || | || ||| | || ||| || |
Sbjct 4488405 TATCCCTTGACGACAAAGTCCTCGACCTTCCAGCCGTCGATG-CTGCCGCCCTTTTCCCG 4488347
Query 145636 ----ATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCT 145690
||| ||| ||| || ||||| || ||| | || ||||| ||| |||| |
Sbjct 4488346 CGTAATCTCCAGCTCGGGGAACGGCCGCGG-CTCGCGCTCGAGCTGTGTCTTAAGGGCAT 4488288
Query 145691 CCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGA 145750
| | ||||| || ||||||||| ||||| |||| |||||| ||| | || ||| | |
Sbjct 4488287 CGATGTGGTCGATGTAGACGTGGGCGTCTCCCATGACGTGTGTGAGGCTTCCCGGCACCA 4488228
Query 145751 GGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCA 145810
|| | | |||||||| ||||| || || || | |||||| || ||||||||||| |
Sbjct 4488227 GGTCGCACACGTGGGCGAGCATGTGCGTGAGAAGCGCGTAGCTTGCAATGTTGAAGGGGA 4488168
Query 145811 CCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG------------------- 145851
|| || |||||||| | || |||||||| |||||||||
Sbjct 4488167 TGCCGAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAGTGGAGGTGGCCCTTTGGCT 4488108
Query 145852 -----------GAGAGCTC--------------CCCGCCCGCC-------------ACGT 145873
||| |||| |||| |||| ||||
Sbjct 4488107 TGTTCTCCTCCGAGGGCTCGGGGGCGTCGACGCCCCGGCCGCGGCCCGGGTACGAGACGT 4488048
Query 145874 AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCC 145933
|||||||| | | |||||| ||||||||||||||| | ||| ||||||||
Sbjct 4488047 AGAACTGGGCGAACATGTGGCACGGCGGCAGGGCCATGCTCTTGAAGTCGCGCGGGTTCC 4487988
Query 145934 AGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT------CTTGATCTCCCCTATCA 145987
| ||| |||||| | || |||| | |||||| | |||| | | |||
Sbjct 4487987 ACGCGCTGAGGATCATCCGCCTGTCGTAGGGGTTGGTGCGCAGCTTG---TGGACGATCT 4487931
Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047
| || |||||||| || |||| ||| ||| || | || ||| |||||| |||
Sbjct 4487930 CGGCC---AGCTGGTCGACACCCTTGCCCGTGTAGTCAGCGCCGGCGTCGACGTACTCGG 4487874
Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107
| || ||||||| ||||||||| ||||||||||| |||||||| ||| || | ||||
Sbjct 4487873 CGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCG 4487814
Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC-- 146165
||| ||| | | | ||||||| || ||||| |||||| |||||||||||||||||||
Sbjct 4487813 TCAGGCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGA 4487754
Query 146166 CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225
| |||| ||| | | ||||| ||| ||| |||||||||||| ||||| |||
Sbjct 4487753 CGTCGCTGAGGG--CCTTGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGAC 4487696
Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
||| | | |||||| | ||| ||||| || |||||||
Sbjct 4487695 GACGGCGCGGAGGAAGACACGCTTCGTGGTGAGGAGGGGGA 4487655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076704112520
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