Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 2e-16
>seq2
Length=5759010
Score = 100 bits (110), Expect = 2e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | |||||| || ||||||| ||||| |||||
Sbjct 4160302 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 4160361
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | ||||||||| || | ||| |||||||| |||||| ||
Sbjct 4160362 GCAAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 4160421
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| || ||| || | ||||| ||||||||||| | ||
Sbjct 4160422 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTAATCGTCTTGCCGGTCAGGGTC 4160481
Query 21159 TTGAC 21163
|||||
Sbjct 4160482 TTGAC 4160486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259133098308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |