Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq7 105 1e-17
>seq7
Length=2761852
Score = 105 bits (116), Expect = 1e-17
Identities = 268/403 (67%), Gaps = 16/403 (4%)
Strand=Plus/Minus
Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841
|| ||| ||| || | ||||| | ||| || | ||| | | ||||| ||||| |||
Sbjct 710977 CTCGACTCCGCCATCGTCTACGACCGAGACTTCAACTACCAATACTTTGGCTTCAAGACG 710918
Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901
|||||| ||| || |||||||| | || |||||||| || || || |||||||||
Sbjct 710917 CTGGAGCGATCATACCTCCTCAAGCTCGACGGCAAGATTGTCGAGCGGCCACAGCACATG 710858
Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTAC 248961
| ||||||||||| || || || || ||||| ||| | || |||||||| |||
Sbjct 710857 ATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTTCTCGAGACATAC 710798
Query 248962 ACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGT 249018
| ||| || | || | || |||||| | || || |||||||| || |||
Sbjct 710797 CACCTCATGTCCAGCAAGTTCT---TCACCCATGCCTCCCCCACCCTCTTCAATGCTGGT 710741
Query 249019 ACCGTCAACAA--TCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCG 249076
||| | ||| |||||| ||| ||||| || | | |||| | |||||| | |
Sbjct 710740 ACC--CCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTCGACATGAAGGACGACAGCATTG 710683
Query 249077 ACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCGGGCGGAA 249133
| || || || ||||| || | ||||| || | ||| || || | || || || |
Sbjct 710682 AGGGTATCTACGACACTCTGA---AGACGTGTGCCATGATCTCCAAGATGGCTGGTGGTA 710626
Query 249134 TCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176
| ||| | |||| | |||||| || | || || |||||
Sbjct 710625 TTGGTTTGAACGTCCACCGCATCCGTGCCACCGGCTCCTACAT 710583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766221150784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |