Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7 149 1e-30
>seq7
Length=2761852
Score = 149 bits (164), Expect = 1e-30
Identities = 299/440 (68%), Gaps = 9/440 (2%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| || || || || |||||||| || ||||| || || ||||| ||||||
Sbjct 1551229 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGG 1551288
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| ||||| | |||| || || |||| ||||| ||| |||| || | |||
Sbjct 1551289 CTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGAC 1551348
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC--- 102094
|| ||||| || |||||||| ||| ||||| | || || |||
Sbjct 1551349 GAGGGTCTGCACACGGACTTTGCCTGCCTGCTG----CACTCCCACCTGAAGA-ACCGCG 1551403
Query 102095 CCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
||| |||| || ||| | || || |||| || |||||||| || || || || ||
Sbjct 1551404 CCAGCAAG-GAGGTGATCCGCGACATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTC 1551462
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
|| || | |||||||| | |||| ||||||| ||| |||||| ||||||
Sbjct 1551463 CTGACCGAGGCCCTGCCTTGCGCTCTGCTGGGCATGAACTCCAACCTGATGAAGCAGTAC 1551522
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTT 102274
||||||||||| || || || |||| | | || || ||| || ||
Sbjct 1551523 ATTGAATTTGTTGCCGACCGCCTGCTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGTCG 1551582
Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334
|||||||||| || ||||| || || ||||| | ||||||||||| |||||
Sbjct 1551583 TCCAACCCCTTTGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAG 1551642
Query 102335 AAGAGAGTCGCCGAGTATCA 102354
||| | |||||||| || ||
Sbjct 1551643 AAGCGCGTCGCCGACTACCA 1551662
Score = 114 bits (126), Expect = 3e-20
Identities = 176/251 (70%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || | ||| ||||| || || ||||||||||||
Sbjct 710628 CCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATG 710687
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911
|| || || | | | | | |||||||| ||||| || |||| | || ||| |
Sbjct 710688 CTGTCGTCCTTCATGTCGACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTACCAGCA 710747
Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971
|| || || |||||||| |||||||| || | | || |||||||| | ||||| ||
Sbjct 710748 TTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTGGTATGTCTCG 710807
Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031
| ||| | ||||| ||| ||||| || ||||| ||||| ||||||| |||
Sbjct 710808 AGAACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATGATCATGTGCTGT 710867
Query 95032 GGGCGCTCAAC 95042
|| ||||| ||
Sbjct 710868 GGCCGCTCGAC 710878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583835172415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |