Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7 149 1e-30 >seq7 Length=2761852 Score = 149 bits (164), Expect = 1e-30 Identities = 299/440 (68%), Gaps = 9/440 (2%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || || || || |||||||| || ||||| || || ||||| |||||| Sbjct 1551229 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGG 1551288 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| ||||| | |||| || || |||| ||||| ||| |||| || | ||| Sbjct 1551289 CTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGAC 1551348 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC--- 102094 || ||||| || |||||||| ||| ||||| | || || ||| Sbjct 1551349 GAGGGTCTGCACACGGACTTTGCCTGCCTGCTG----CACTCCCACCTGAAGA-ACCGCG 1551403 Query 102095 CCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 ||| |||| || ||| | || || |||| || |||||||| || || || || || Sbjct 1551404 CCAGCAAG-GAGGTGATCCGCGACATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTC 1551462 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 || || | |||||||| | |||| ||||||| ||| |||||| |||||| Sbjct 1551463 CTGACCGAGGCCCTGCCTTGCGCTCTGCTGGGCATGAACTCCAACCTGATGAAGCAGTAC 1551522 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTT 102274 ||||||||||| || || || |||| | | || || ||| || || Sbjct 1551523 ATTGAATTTGTTGCCGACCGCCTGCTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGTCG 1551582 Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334 |||||||||| || ||||| || || ||||| | ||||||||||| ||||| Sbjct 1551583 TCCAACCCCTTTGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAG 1551642 Query 102335 AAGAGAGTCGCCGAGTATCA 102354 ||| | |||||||| || || Sbjct 1551643 AAGCGCGTCGCCGACTACCA 1551662 Score = 114 bits (126), Expect = 3e-20 Identities = 176/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||||||| || || | ||| ||||| || || |||||||||||| Sbjct 710628 CCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATG 710687 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | | | |||||||| ||||| || |||| | || ||| | Sbjct 710688 CTGTCGTCCTTCATGTCGACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTACCAGCA 710747 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || || |||||||| |||||||| || | | || |||||||| | ||||| || Sbjct 710748 TTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTGGTATGTCTCG 710807 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 | ||| | ||||| ||| ||||| || ||||| ||||| ||||||| ||| Sbjct 710808 AGAACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATGATCATGTGCTGT 710867 Query 95032 GGGCGCTCAAC 95042 || ||||| || Sbjct 710868 GGCCGCTCGAC 710878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583835172415