Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 >seq2 Length=5759010 Score = 109 bits (120), Expect = 5e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 |||| ||| | ||||| | |||| ||||||||||| |||| | ||| | | |||| Sbjct 4488294 AGGGCATCGATGTGGTCGATGTAGACGTGGGCGTCTCCCATGACGTGTGTGAGGCTTCCC 4488235 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || |||| | ||||| |||| || | ||| || || |||||||| || ||||| Sbjct 4488234 GGCACCAGGTCGCACACGTGGGCGAGCATGTGCGTGAGAAGCGCGTAGCTTGCAATGTTG 4488175 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 || |||| ||||||||||||||| ||||| |||||| ||||||||| Sbjct 4488174 AAGGGGATGCCGAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 4488127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775932224240