Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq7 132 7e-26
>seq7
Length=2761852
Score = 132 bits (146), Expect = 7e-26
Identities = 242/354 (68%), Gaps = 3/354 (1%)
Strand=Plus/Minus
Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033
||||||||||||||| | || || ||||||||||| || || |||||||| || ||
Sbjct 1551360 GTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 1551301
Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093
||||| || ||||| || ||||| ||||| | || |||||||| || || || ||
Sbjct 1551300 CCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGC 1551241
Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACTTTTGAGC 50150
|||||||||||| || | || || | || | |||| || ||||| |||
Sbjct 1551240 GGCAAAGGCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGATCCATCGGATAGC 1551181
Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210
||| || |||||||| | ||||| || || || || || || ||||| ||| |
Sbjct 1551180 CCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAAGAGGTAGCTGCG 1551121
Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 50270
| | || || | ||||| ||||| | || ||| | || || || |||||
Sbjct 1551120 CTGGCTGTGCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTCTCGGAGTGTATGTT 1551061
Query 50271 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324
|| || ||||| || |||||||| || | |||||||| |||||| || ||
Sbjct 1551060 CTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCTC 1551007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268683281320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |