Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 2e-24
>seq5
Length=3583426
Score = 127 bits (140), Expect = 2e-24
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGC 5653
|||||||| || || |||||| ||| | |||| | ||| || || |||||||||
Sbjct 1544982 AGCTGCGCGATCCGATCGCCCTCCTTGATCTCGTAGTCGGCGTCCGCGTGATTGAACAGC 1545041
Query 5654 ACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAG 5713
| ||| ||| |||||||||||| ||||| || |||||||||||| ||||||||||
Sbjct 1545042 AGCACCTTGACGGGGCCGCGGTAGTCAGCGTCGATGACGCCCGCGCCCGTGTCGATGAAG 1545101
Query 5714 TGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
|||||| || ||||| ||||||||||| | ||||||||
Sbjct 1545102 TGCTTGGAGGCGAGGCCCGAGCGGGGAGCAATGCGGCCGT 1545141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430054331863256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |