Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 7e-16
>seq2
Length=5759010
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/207 (72%), Gaps = 5/207 (2%)
Strand=Plus/Minus
Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447
||| || || | ||||| | ||||||||| ||||| || | || | ||| || | |||
Sbjct 4488331 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTTAAGGGCATCGATGTGGTCGATGTA 4488272
Query 25448 GACGTGAGCGTCTCCCA-GA-GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAA 25505
|||||| |||||||||| || ||||| | || |||||| | || || ||||
Sbjct 4488271 GACGTGGGCGTCTCCCATGACGTGTGTG-AGGCT-TCCCGGCACCAGGTCGCACACGTGG 4488214
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| | ||||| |||||| || |||||| || ||||| ||||| | |||| ||||||
Sbjct 4488213 GCGAGCATGTGCGTGAGAAGCGCGTAGCTTGCAATGTTGAAGGGGATGCCGAGGCCCATG 4488154
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACA 25592
|| | |||| |||||||||||| ||
Sbjct 4488153 TCGCAG-GACCGCTGGTAGAGCTGGCA 4488128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137546109449
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |