Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 7e-16 >seq2 Length=5759010 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/207 (72%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447 ||| || || | ||||| | ||||||||| ||||| || | || | ||| || | ||| Sbjct 4488331 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTTAAGGGCATCGATGTGGTCGATGTA 4488272 Query 25448 GACGTGAGCGTCTCCCA-GA-GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAA 25505 |||||| |||||||||| || ||||| | || |||||| | || || |||| Sbjct 4488271 GACGTGGGCGTCTCCCATGACGTGTGTG-AGGCT-TCCCGGCACCAGGTCGCACACGTGG 4488214 Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || | ||||| |||||| || |||||| || ||||| ||||| | |||| |||||| Sbjct 4488213 GCGAGCATGTGCGTGAGAAGCGCGTAGCTTGCAATGTTGAAGGGGATGCCGAGGCCCATG 4488154 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACA 25592 || | |||| |||||||||||| || Sbjct 4488153 TCGCAG-GACCGCTGGTAGAGCTGGCA 4488128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137546109449