Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 107 3e-19
seq7 104 4e-18
>seq8
Length=1441345
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 940646 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCTGCTAT 940588
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 940587 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 940547
>seq7
Length=2761852
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| || ||
Sbjct 1110958 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCCGCCAT 1110900
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 1110899 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1110859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075188114009
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |