Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 107 3e-19 seq7 104 4e-18 >seq8 Length=1441345 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || || |||||||| ||||| Sbjct 940646 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCTGCTAT 940588 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 940587 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 940547 >seq7 Length=2761852 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || || |||||||| || || Sbjct 1110958 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCCGCCAT 1110900 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 || ||||| |||||||||||||| ||||||||| |||||| Sbjct 1110899 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1110859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075188114009