Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 327 3e-84 >seq7 Length=2761852 Score = 327 bits (362), Expect = 3e-84 Identities = 1062/1631 (65%), Gaps = 36/1631 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTC-GTAATCCACAGATGTCTTC 363605 ||||| || ||| | || || | | ||||||||| || | | || || ||| |||| || Sbjct 710776 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACCCCGCAAGCC-CAGCTGTCCTC 710718 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 ||||| || | | ||||||||||| ||| |||||||||| ||||| || |||| Sbjct 710717 ATGCTTCCTGGTCGACATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTGAAGAC 710658 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724 ||||| | || ||||||| || || || |||||| | | || ||||| | |||| Sbjct 710657 GTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTTTGAACG-TCCACCGCATCCGTG 710599 Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | || | | |||||| |||||| || ||| || || | | |||||||| Sbjct 710598 CCACCGG-CTCCTACATTGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTG 710540 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || || || |||| ||||| | |||||||||||||| || ||||| || || Sbjct 710539 CGAGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGTCCTGGTGCC 710480 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || |||||||| || ||||| | ||||| || ||||| ||||| || Sbjct 710479 TTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAG 710420 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || || || |||||| ||| || ||| || | || Sbjct 710419 AACCACGGTAAGGAGGAGGTTCGCGCTCGCGACCTGTTCCTTGCCCTGTGGATTCCCGAT 710360 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | ||||| |||||| Sbjct 710359 CTCTTCATGAAGCGTGTCGAG--AAGAACCTGGACTGGACGCTCATGTGCCCCAACGAAT 710302 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| | || | || || || | || ||||| ||||||||||| || Sbjct 710301 GCCCTGGCCTTGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGA 710242 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 |||||| | || ||||| || | ||| |||||||| |||| ||||| |||| Sbjct 710241 GCGAGGGACGTGGCCGCAAGACCATCCGCGCTCAGAAGCTGTGGTACTCCATCCTGGAGG 710182 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | |||| ||||| || | |||| ||| | ||||| ||| |||||||||||| || Sbjct 710181 CTCAGACCGAGACCGGTAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCA 710122 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATAC 364260 ||||| || |||| || || | || |||| | ||||| || || ||||| || || ||| Sbjct 710121 ACCAGAAGAACCTGGGAACTA-TCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTAC 710063 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319 || ||||| ||| ||| || || ||| | || || | || || || || || || Sbjct 710062 TGTGCCCCCGATGAGGTTGCTGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGTC 710003 Query 364320 ---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370 || |||| ||| ||| | || | ||| | || || ||| | || Sbjct 710002 GACTACAACGAAGGATGCTAC----GACTTCAAGAAGCTTCACGAAGTCACC-AAGGTGG 709948 Query 364371 TACT-TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429 | | | || ||| || | || || ||| |||| || | | || ||| Sbjct 709947 TCGTCCGTAACCTCAACCGCATCATTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCA 709888 Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489 || ||||| || || || |||||| | ||||| ||||| || ||||||| || Sbjct 709887 ACAGCAACATGCGCCACCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCC 709828 Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549 | || || | ||||| || ||||| ||||| | || || ||| ||||||| | Sbjct 709827 TCGCTCTGCGTCTGCCCTTTGAGTCTCCTGAGGCTCGCGAGCTGAACAAGCAGATCTTCG 709768 Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609 | || || || |||||| | ||||| || | || || | |||| || Sbjct 709767 AGACCATTTACCATGCCGCCCTTGAGGCTTCCATGGAGATTGCCAAGATTGAGGGCCCGT 709708 Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669 || | | |||| || || || |||| | | |||| ||| | ||| | | Sbjct 709707 ACGAATCGTTCAAGGGATCACCCGCATCTGAGGGCATCCTGCAGTATGACATGTGGGACG 709648 Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGT 364728 ||| ||| || | || ||| | ||||| | || | | | | | ||| |||| ||| Sbjct 709647 TCAAGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGC-AGATCAAGGAGCACGGT 709589 Query 364729 ACTCGCAA---CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTC 364785 ||||| || ||||| || ||||||||||| || ||| | |||||||| Sbjct 709588 GTCCGCAACAGCTTGCTCGT---CGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTG 709532 Query 364786 GGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCC 364845 || |||||||| |||||||| || | || ||| | || || || || ||| | Sbjct 709531 GGCAACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCT 709472 Query 364846 GGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGG 364905 || || || | ||| || || | || ||||||| || |||| ||| |||||| Sbjct 709471 GGTGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGG 709412 Query 364906 GGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGA 364965 ||| |||||||||| ||||| |||| || || || | |||||||| || Sbjct 709411 TCCGACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAAC 709352 Query 364966 TTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTC 365025 | || || || | ||| || | ||||| ||||| ||||| || || ||| || Sbjct 709351 ATCCCCGAGGACATCAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGCGTCAAATC 709292 Query 365026 ATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTC 365085 | | |||||||||||||| |||||||| ||| ||| |||||| | ||| | | Sbjct 709291 GTCCAGATGGCGGCCGATCGTGGTGCTTTCATCGACCAGTCCCAGTCCCTCAACATCCAC 709232 Query 365086 ATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGT 365145 |||| | || || | |||| | || |||||| ||| ||| ||||| |||| Sbjct 709231 ATGAAGGACCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGGT 709172 Query 365146 CTTAAGACAGG 365156 || ||||| || Sbjct 709171 CTCAAGACCGG 709161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353382910166