Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7 327 3e-84
>seq7
Length=2761852
Score = 327 bits (362), Expect = 3e-84
Identities = 1062/1631 (65%), Gaps = 36/1631 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTC-GTAATCCACAGATGTCTTC 363605
||||| || ||| | || || | | ||||||||| || | | || || ||| |||| ||
Sbjct 710776 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACCCCGCAAGCC-CAGCTGTCCTC 710718
Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
||||| || | | ||||||||||| ||| |||||||||| ||||| || ||||
Sbjct 710717 ATGCTTCCTGGTCGACATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTGAAGAC 710658
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724
||||| | || ||||||| || || || |||||| | | || ||||| | ||||
Sbjct 710657 GTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTTTGAACG-TCCACCGCATCCGTG 710599
Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
| || | | |||||| |||||| || ||| || || | | ||||||||
Sbjct 710598 CCACCGG-CTCCTACATTGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTG 710540
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
|| || || |||| ||||| | |||||||||||||| || ||||| || ||
Sbjct 710539 CGAGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGTCCTGGTGCC 710480
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
||||| || || |||||||| || ||||| | ||||| || ||||| ||||| ||
Sbjct 710479 TTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAG 710420
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || ||||| | || || || || |||||| ||| || ||| || | ||
Sbjct 710419 AACCACGGTAAGGAGGAGGTTCGCGCTCGCGACCTGTTCCTTGCCCTGTGGATTCCCGAT 710360
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||||| || ||| | | | | | ||| | ||| | ||||| ||||||
Sbjct 710359 CTCTTCATGAAGCGTGTCGAG--AAGAACCTGGACTGGACGCTCATGTGCCCCAACGAAT 710302
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081
| || || ||| | || | || || || | || ||||| ||||||||||| ||
Sbjct 710301 GCCCTGGCCTTGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGA 710242
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
|||||| | || ||||| || | ||| |||||||| |||| ||||| ||||
Sbjct 710241 GCGAGGGACGTGGCCGCAAGACCATCCGCGCTCAGAAGCTGTGGTACTCCATCCTGGAGG 710182
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| |||| ||||| || | |||| ||| | ||||| ||| |||||||||||| ||
Sbjct 710181 CTCAGACCGAGACCGGTAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCA 710122
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATAC 364260
||||| || |||| || || | || |||| | ||||| || || ||||| || || |||
Sbjct 710121 ACCAGAAGAACCTGGGAACTA-TCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTAC 710063
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319
|| ||||| ||| ||| || || ||| | || || | || || || || || ||
Sbjct 710062 TGTGCCCCCGATGAGGTTGCTGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGTC 710003
Query 364320 ---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370
|| |||| ||| ||| | || | ||| | || || ||| | ||
Sbjct 710002 GACTACAACGAAGGATGCTAC----GACTTCAAGAAGCTTCACGAAGTCACC-AAGGTGG 709948
Query 364371 TACT-TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429
| | | || ||| || | || || ||| |||| || | | || |||
Sbjct 709947 TCGTCCGTAACCTCAACCGCATCATTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCA 709888
Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489
|| ||||| || || || |||||| | ||||| ||||| || ||||||| ||
Sbjct 709887 ACAGCAACATGCGCCACCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCC 709828
Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549
| || || | ||||| || ||||| ||||| | || || ||| ||||||| |
Sbjct 709827 TCGCTCTGCGTCTGCCCTTTGAGTCTCCTGAGGCTCGCGAGCTGAACAAGCAGATCTTCG 709768
Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609
| || || || |||||| | ||||| || | || || | |||| ||
Sbjct 709767 AGACCATTTACCATGCCGCCCTTGAGGCTTCCATGGAGATTGCCAAGATTGAGGGCCCGT 709708
Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATG 364669
|| | | |||| || || || |||| | | |||| ||| | ||| | |
Sbjct 709707 ACGAATCGTTCAAGGGATCACCCGCATCTGAGGGCATCCTGCAGTATGACATGTGGGACG 709648
Query 364670 TCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGT 364728
||| ||| || | || ||| | ||||| | || | | | | | ||| |||| |||
Sbjct 709647 TCAAGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGC-AGATCAAGGAGCACGGT 709589
Query 364729 ACTCGCAA---CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTC 364785
||||| || ||||| || ||||||||||| || ||| | ||||||||
Sbjct 709588 GTCCGCAACAGCTTGCTCGT---CGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTG 709532
Query 364786 GGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCC 364845
|| |||||||| |||||||| || | || ||| | || || || || ||| |
Sbjct 709531 GGCAACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCT 709472
Query 364846 GGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGG 364905
|| || || | ||| || || | || ||||||| || |||| ||| ||||||
Sbjct 709471 GGTGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGG 709412
Query 364906 GGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGA 364965
||| |||||||||| ||||| |||| || || || | |||||||| ||
Sbjct 709411 TCCGACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAAC 709352
Query 364966 TTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTC 365025
| || || || | ||| || | ||||| ||||| ||||| || || ||| ||
Sbjct 709351 ATCCCCGAGGACATCAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGCGTCAAATC 709292
Query 365026 ATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTC 365085
| | |||||||||||||| |||||||| ||| ||| |||||| | ||| | |
Sbjct 709291 GTCCAGATGGCGGCCGATCGTGGTGCTTTCATCGACCAGTCCCAGTCCCTCAACATCCAC 709232
Query 365086 ATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGT 365145
|||| | || || | |||| | || |||||| ||| ||| ||||| ||||
Sbjct 709231 ATGAAGGACCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGGT 709172
Query 365146 CTTAAGACAGG 365156
|| ||||| ||
Sbjct 709171 CTCAAGACCGG 709161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353382910166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |