Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7 114 2e-20 >seq7 Length=2761852 Score = 114 bits (126), Expect = 2e-20 Identities = 354/544 (65%), Gaps = 8/544 (1%) Strand=Plus/Minus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| ||||||||||| | || | ||||||||||| || || |||||||| || || Sbjct 1551360 GTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 1551301 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 ||||| || ||||| || ||||| ||||| | || ||||| || || || || || Sbjct 1551300 CCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGC 1551241 Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTTTTGAGC 32851 |||||||||| || | || || | || | |||| || ||||| ||| Sbjct 1551240 GGCAAAGGCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGATCCATCGGATAGC 1551181 Query 32852 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 32911 ||| || |||||||| | ||||| || ||||| || || || ||||| ||| | Sbjct 1551180 CCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAAGAGGTAGCTGCG 1551121 Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971 | | || || | || || || || | || ||| | || || || ||||| Sbjct 1551120 CTGGCTGTGCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTCTCGGAGTGTATGTT 1551061 Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031 || || || || || ||||||||||| | |||||||| |||||| || || | Sbjct 1551060 CTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCTCGCCGCT 1551001 Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091 || || || | | || || || || || ||||| ||| || || || |||| | Sbjct 1551000 GAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAGGAT 1550941 Query 33092 ATGTTTTATAAAATATTTTTCGTC-TGGTGTTA---GTTTATTCCAATCATTGATATCTT 33147 || || || || || ||||| | || | | | || ||||| || | | || | Sbjct 1550940 GTGAGAGATGAAGTACTTCTCGTCATCGT-TCAGGCGGTTGTTCCAGTCGTGCAGGTCCT 1550882 Query 33148 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 33207 | || | || | || || | ||||| || || ||||| ||||| || ||||| | || Sbjct 1550881 TGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCC 1550822 Query 33208 AGAT 33211 |||| Sbjct 1550821 AGAT 1550818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631897034800