Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq7 149 7e-31
>seq7
Length=2761852
Score = 149 bits (164), Expect = 7e-31
Identities = 481/735 (65%), Gaps = 29/735 (4%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA-CGTAC 92985
|| || |||||||| |||||||| ||||| | | ||||| || || ||| || |
Sbjct 1551539 TCGGCAACAAATTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCCAGCAGAGCGCA- 1551481
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT-- 93043
||| || || ||||||| ||| || | |||||| ||||| || | | ||| ||
Sbjct 1551480 AGGCAGGGCCTCGGTCAGGAACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGTCGCG 1551421
Query 93044 -ATTACTCTACTATTTGGTG--GTTTTT---GTACGACATAATTGTACATTAAGCACGCA 93097
|| || || || ||| | ||| || || || || || | ||| |||
Sbjct 1551420 GATCAC-CTCCTTGCTGGCGCGGTTCTTCAGGTGGGA-------GTGCAGCAGGCAGGCA 1551369
Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157
||||| || || | ||| ||||| || || || | ||| ||| || || | || ||
Sbjct 1551368 AAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGC 1551309
Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217
| || || || ||||||||||| || || || ||||| ||| || || |||||
Sbjct 1551308 ATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCC 1551249
Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--CT-GATC 93274
|| ||||| ||||| || || | || | |||||| | ||| || || || ||||
Sbjct 1551248 TCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA---GGAGGAGTTCTTGTCCTGGATC 1551192
Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAAT 93334
||| | |||||| || || || || || ||||| | || || || ||||| ||
Sbjct 1551191 CATCGGATAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAAG 1551132
Query 93335 AGGTAATCTCGCTCG-TCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTC 93393
||||| |||| | | | || | ||||| || ||||| | ||| || ||| | ||
Sbjct 1551131 AGGTAGCTGCGCTGGCTGTGCTCCTTG-ATGTAAGTGTCGATGAGCAGCGAGTACGTCTC 1551073
Query 93394 AGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTG 93453
|| || | |||||||| || ||||| |||||||| || | ||| || | |||||
Sbjct 1551072 GGAGTGTATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTG 1551013
Query 93454 CACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaa 93513
|| || || | ||| || || || || ||||| || || || || || || ||
Sbjct 1551012 GACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAA 1550953
Query 93514 aaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATC 93570
|| |||| || || || || | ||||| ||||| || | | || | ||| ||
Sbjct 1550952 GAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTC 1550893
Query 93571 GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTT 93630
| || || || || || || | || ||| ||||||| || || || || || || ||
Sbjct 1550892 GTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCTTCTT 1550833
Query 93631 GTACATATCCCATAT 93645
|||||| | ||| ||
Sbjct 1550832 GTACATTTGCCAGAT 1550818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860709510120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |