Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq7 480 2e-130 >seq7 Length=2761852 Score = 480 bits (532), Expect = 2e-130 Identities = 1244/1882 (66%), Gaps = 79/1882 (4%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| || ||| | ||||||| ||| | ||||||||||||||||||||| Sbjct 709110 ACGGTGAACTGGATAGGCGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 709169 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| || || ||||||| || | ||| |||| || | Sbjct 709170 AGACCGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGG------- 709222 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||||| || || ||||||||||||| |||||||| ||| | | || || Sbjct 709223 --GTCCTT---CATGTGGATGTTGAGGGACTGGGACTGGTCGATGAAAGCACCACGATCG 709277 Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976 || ||||| || || | |||||| ||||| | | |||||||| | | |||| Sbjct 709278 GCCGCCATCTGGACGATTTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAGAGCCTTG 709337 Query 243977 AGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036 | || |||||||| ||||||||| | ||||| || | | | |||| || | Sbjct 709338 ATGTCCTCGGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTC 709397 Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTT 244092 |||| ||| ||||||||| | |||| ||| || ||||| | || Sbjct 709398 TTCATGGCGTCGGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGG----TT 709453 Query 244093 CACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTC 244152 || ||||| ||||| || | || || || |||||||||| |||| || ||||| Sbjct 709454 GACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTC 709513 Query 244153 GATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAG 244212 || || || |||||||||| ||||| | ||||| ||||| |||||||| | || || Sbjct 709514 GAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACGAG 709573 Query 244213 CAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACAT 244272 || ||||| | || |||||| || ||| | |||| || ||| ||||||| Sbjct 709574 CAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCACAG 709633 Query 244273 GCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGAC 244332 | | ||| | | ||| | ||||||||||| ||||||| | |||| | || Sbjct 709634 GTCGGAGGGCT---------TGACGTCCCACATGTCATACTGCAGGATGCCCT--CAGAT 709682 Query 244333 GGGGCTG--CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG 244390 | || || |||| | | | ||| || || || || ||| | || | | Sbjct 709683 GCGGGTGATCCCTTGAACGATTCGTACGGGCCCTCAATCTTGGCAATCTCCATGGAAGCC 709742 Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 || |||||||| | ||| ||||||||||||||| |||||||| ||||| |||| Sbjct 709743 TCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCT----- 709797 Query 244451 CAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505 |||| || |||| | | || | ||| |||| || || ||||| || |||| Sbjct 709798 CAGGAGACTCAAAGGGCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGA 709857 Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGC 244565 || || |||| ||| ||| ||||| | ||| || | || |||||| ||| Sbjct 709858 CACCAATAGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAATGGTTCA 709917 Query 244566 CGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625 | || || | ||||||||| ||| || || | ||| ||| ||| || | Sbjct 709918 CATCAATGATGCGGTTGAGGTTACGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGA 709977 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 ||||||| | ||||| | | || || || || || |||||| | Sbjct 709978 AGTCGTA-------GCATCCTTCG---TTGTAGTCG--ACGAAGGCGGGGAGGGCCAGAG 710025 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 ||||| ||||||||| || ||||| || | | ||||| || ||||| ||||||| Sbjct 710026 AGGCCAAGTTGCAGACAGCAACCTCATCGGGGGCACAGTACTCGATGATCTCAGTGCAGA 710085 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 ||||| || ||| || ||||||| || || ||| |||| ||||||| |||| Sbjct 710086 GGTTAGAGCTGCGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCT 710145 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 |||||||||||||||| ||||||||| ||| || | |||| | || ||| || | Sbjct 710146 TGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCCAGGATGGAGTACCACAGCT 710205 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | ||| || ||| |||| ||| | ||||| |||||| |||||| ||| Sbjct 710206 TCTGAGCGCGGATGGTCTTGCG-GCCACGTCCCTCGCTCTCGTACTTTTCGTACAGAGCC 710264 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGAC 244982 || ||||| ||| || || | ||||| ||||| || | ||||||||||| Sbjct 710265 TCAAACTCCTCGCCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTG--GGGCACATGAGCG 710322 Query 244983 TCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 |||| || | | || ||| | || ||||||||| ||||| ||||| ||||| ||| Sbjct 710323 TCCAGTCCAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCACAGGGCAAGGA 710382 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102 | ||||| | | | ||| ||| || |||||| | || || | ||||||| Sbjct 710383 ACAGGTCGCGAGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGGAAGTCAA 710442 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 |||||||| ||||||||||||| | ||||| || | ||| || || ||||||||||| | Sbjct 710443 AGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCGC 710502 Query 245163 CCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCG 245218 ||||||| | | | |||||| |||||||| ||||| | || | |||||| Sbjct 710503 CCTGGTCGA----CGTATCGAGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCG 710558 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC 245278 || ||| |||||||||||| ||||||| ||| || | | || | | || | | Sbjct 710559 TTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTC 710618 Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 | || | || || || ||||||||| | ||| || |||| | ||||| || Sbjct 710619 AAACCAATACCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGTCGTAGATA 710678 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG-GG 245397 ||||| |||||||| |||||||| || ||| ||||| |||||||||| ||||||| || Sbjct 710679 CCCTCAATGCTGTCGTCCTTCATGTCGACCAGGAAGCATGAGGACAGCT-GGGCTTGCGG 710737 Query 245398 GCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCC 245457 | | | | ||||| || |||||| ||| ||||| ||| | ||| || | || Sbjct 710738 GGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTG 710797 Query 245458 GTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGA 245516 ||| |||| ||| | | || |||| ||| || ||| | ||| ||| | ||||| Sbjct 710798 GTATGTCTCGAGAACACGCTCAATGTCGTCTCCCCAGATGCCAACGGC-CACTCGCATGA 710856 Query 245517 GGGTGTGCTGGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCT 245573 ||||||| ||| |||| || || ||| | |||||| | ||| || |||| Sbjct 710857 TCATGTGCTGTGGCCGCTCGACAATCTTGCCGTCGAG---CTTGAGGAGGTATGATCGCT 710913 Query 245574 CGAGCGTCTTGAACCCAAAGTA 245595 | ||||||||||| |||||||| Sbjct 710914 CCAGCGTCTTGAAGCCAAAGTA 710935 Score = 453 bits (502), Expect = 2e-122 Identities = 625/861 (73%), Gaps = 30/861 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||||||||||||| Sbjct 1550818 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAGGAGATTGACCTG 1550877 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415 |||||||| | || |||| | || | |||| || |||| |||| ||| || Sbjct 1550878 TCCAAGGACCTGCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 1550936 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| |||||||||||||||||||| |||||||| ||||| |||||||||| | | Sbjct 1550937 TCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 1550996 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| ||||| ||||||||||||||||||||||| || Sbjct 1550997 CTTCAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 1551056 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||| ||| |||| | ||||||| |||| |||||| ||| | Sbjct 1551057 GGAGAACATACACTCCGAGACGTACTCG---CTGCTCATCGACACTTACATCAAGGAGCA 1551113 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | | |||| | | || ||||| || || ||||| || || |||||| |||||||| Sbjct 1551114 CAGCCAGCGCAGCTACCTCTTCAACGCGATTGAGACCATTCCTTGCATCCGCAAGAAGGC 1551173 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAG 42711 |||||||| || |||||| || | | || | | | || | | || | ||||| | Sbjct 1551174 TGACTGGGCTATCCGATGGATCCAG-GACAAGAACTCCTCCTTTGCCCAGCGCCTGGTTG 1551232 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 ||||| ||||||||||||| ||||||||| || ||||| ||||||||||||||||||| Sbjct 1551233 CCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCA 1551292 Query 42772 AGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || || || ||| |||||||| || ||||| || ||||| |||||| | |||||| Sbjct 1551293 AGAAG-CGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAG 1551351 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890 || ||||| | ||||||||||||||| ||| ||| |||||| | | || || Sbjct 1551352 GGTCTGCACACGGACTTTGCCTGCCTGCTGCACTC---CCACCTGAAGAACCGCGCCAGC 1551408 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 |||||| | |||| | ||||||||| || ||||| |||||| |||||||||| || Sbjct 1551409 AAGGAGGTGATCCGCGACATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTCCTGACC 1551468 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010 || | ||||| | ||| | ||||||||| | |||| ||| ||||||| | Sbjct 1551469 GAGGCCCTGCCTTGCGCTCTGCTGGGCATGAACTCCAACCTGATGAAGCAGTACATTGAA 1551528 Query 43011 TACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACG 43064 | || |||||| | |||| | | | | |||| || || | ||||| || Sbjct 1551529 TTTGTTGCCGAC---CGCCTG---CTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGTCG 1551582 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 | |||||| |||||||||||||||||||| ||| |||||||||||||| || ||| Sbjct 1551583 TCCAACCCCTTTGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAG 1551642 Query 43125 AAGCGCGTCGCCGACTACCAG 43145 ||||||||||||||||||||| Sbjct 1551643 AAGCGCGTCGCCGACTACCAG 1551663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339046544880