Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7 107 4e-18 >seq7 Length=2761852 Score = 107 bits (118), Expect = 4e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | ||| |||| ||| | ||| || | || ||| Sbjct 1551427 ATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTCCTGACCGAGGCCCTGCCTTGCGCT 1551486 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | || ||| |||||||| ||||| || ||||||||| | Sbjct 1551487 CTGCTGGGCATGAACTCCAACCTGATGAAGCAGTACATTGAATTTGTTGCCGACCGCCTG 1551546 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| || || | ||||| |||||||| || |||||||||| |||||||||| Sbjct 1551547 CTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTATGGAG 1551606 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || || || || || |||||||| || ||||| ||| || || || Sbjct 1551607 AACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGCGTCGCCGACTACCAGAAG 1551666 Query 243742 CCTGGTGTGATGAA 243755 ||||||| ||||| Sbjct 1551667 GCTGGTGTCATGAA 1551680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879816301550