Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7 203 4e-47 >seq7 Length=2761852 Score = 203 bits (224), Expect = 4e-47 Identities = 1074/1693 (63%), Gaps = 49/1693 (3%) Strand=Plus/Plus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTT-GGCCTTTGATCGGAGGTAGTACATCCCCGT 113616 |||| | ||||||| || || | || || ||||| | |||||||||||||| || || Sbjct 709107 TCAACGGTGAACTGGATAGG-CGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGT 709165 Query 113617 CTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACT 113676 |||||| || |||||||| | | ||||| || | |||| | || || Sbjct 709166 CTTGAGACCGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTC 709225 Query 113677 TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCAT 113736 | |||| || ||| | ||||| || |||||||| |||||||| |||||||| Sbjct 709226 CTTCATGTGGATGTTGAGGGACTGGGACTGGTCGATGAAAGCACCACGATCGGCCGCCAT 709285 Query 113737 ATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATC 113796 | | | | | ||| ||||| || || |||| || ||| || || || Sbjct 709286 CTGGACGATTTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTCCTC 709345 Query 113797 TGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATC 113856 ||||| | ||| || ||||||||||| | | | ||| | | |||||| | Sbjct 709346 GGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGC 709405 Query 113857 CTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAAC 113913 | ||||| || || | | || |||| |||| || |||||||| Sbjct 709406 GTCGGACCACAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAACCTG 709462 Query 113914 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTC 113973 |||||||| || ||| |||| | | ||||| |||| ||||| ||||| ||||| || Sbjct 709463 GAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTC 709522 Query 113974 ATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||||| |||| ||| || | ||| ||| ||||||||||| || | ||| | |||||| Sbjct 709523 GTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTT 709582 Query 114034 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GT-TGAGCT 114089 |||| ||| | ||| | || | |||||||||| |||||| || | || ||| Sbjct 709583 GCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGGAG-- 709640 Query 114090 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAA 114149 | || | | |||||| ||| |||| ||||| || | || || || ||||||| | Sbjct 709641 --GGCTTGACGTCCCACATGTCATACTGCAGGATGCCCTCAGATGCGGGTGATCCCTTGA 709698 Query 114150 ATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 114209 | | ||||| |||||||||| || || | || | ||||| ||||| || || | Sbjct 709699 ACGATTCGTACGGGCCCTCAATCTTGGCAATCTCCATGGAAGCCTCAAGGGCGGCATGGT 709758 Query 114210 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 114269 | || ||||| || || | |||| | ||||| || ||||| | || | Sbjct 709759 AAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAGGGCAGAC 709818 Query 114270 GGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 114328 ||| | | || | || || ||||| || ||||||| ||||| || || || | | Sbjct 709819 -GCAGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAATAGGTCGGTGGCGC 709877 Query 114329 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 || || || || || || || || ||| ||| ||| || | | || || Sbjct 709878 ATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAATGGTTCACATCAATGATGCGGTTGAGG 709937 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 || | ||| ||||| |||| ||| |||||||| | | | || | | | | Sbjct 709938 TTACGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAGCATCCTTCGTTG 709997 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | | ||| | || ||||| | || |||| || || |||| |||||| Sbjct 709998 TAGTCGACGAAGGCGGGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAACCTCATCGGGG 710057 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 || |||||| || || || || || | || || || || || |||| |||||| Sbjct 710058 GCACAGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTCTTC 710117 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || ||| ||| || ||||||||| |||||| | || | || ||||| || Sbjct 710118 TGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTC 710177 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATC----GGCGGCTGGCACAGTGGCGTTGGCTC 114683 || | || || || | | ||| | | || |||| ||| | ||| | | | Sbjct 710178 TGAGCCTCCAGGATGGAGTACCACAGCTTCTGAGCGCGGATGG---TCTTGCG--GCCAC 710232 Query 114684 GCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 114743 | ||||| |||||||||| ||| || || |||||||| || || | || | | Sbjct 710233 GTCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAA 710292 Query 114744 GCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGCT 114800 | || || || || | ||||| | ||| | ||| | ||| || ||| ||||||| Sbjct 710293 GGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCA--GTCCAGGTTCTTCTCGACACGCT 710349 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 |||||||||| || || ||||| || || ||| || || ||| |||| | || || | Sbjct 710350 TCATGAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCT 710409 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || || | || | ||||| | || || |||||||| || || |||| Sbjct 710410 TACCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGT 710469 Query 114921 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGG 114974 | | || | | || | |||| || |||||| || || | || ||| Sbjct 710470 AGATGGCAAAGGCACC---AGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGT 710526 Query 114975 CATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--T 115032 || || || || ||||| || || || || | || ||| || || || || | Sbjct 710527 TGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGT 710586 Query 115033 ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGA 115092 | ||| | |||| | || |||| || || ||||||||| || ||| ||| || Sbjct 710587 AGGAGCC--GGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGA 710644 Query 115093 GATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGC 115152 ||| || ||| | | ||| || ||||||| || || || ||| |||| | | Sbjct 710645 GATCATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTC 710704 Query 115153 GATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTG 115211 || |||||||| |||| || ||| | || |||||||| ||||||||||| || | Sbjct 710705 GACCAGGAAGCATGAGGACAGCTG-GGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGG 710763 Query 115212 TCGCGTGGATGAA 115224 || ||| |||| Sbjct 710764 AGGCATGGGTGAA 710776 Score = 127 bits (140), Expect = 2e-24 Identities = 348/525 (66%), Gaps = 15/525 (3%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||||||||| |||||||| || || || ||| ||| || Sbjct 1551372 GGCAAAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1551313 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||||||||||||||| | |||||| || | ||| | ||| ||||||||| Sbjct 1551312 GGGCATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1551253 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| || |||| ||||||||| || || |||| Sbjct 1551252 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAG---GAGTTCTTGTCCTG 1551196 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| || ||||| | ||||| || ||| || || | ||||| ||||| | Sbjct 1551195 GATCCATCGGATAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTT 1551136 Query 126283 AAAGA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 |||| || || | | ||| | || |||||||| | || ||||| || || Sbjct 1551135 GAAGAGGTAGCTGCGCTGGCTG--TGCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTAC 1551078 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 || ||| ||| | | | ||| || | ||| | ||||||| |||| || ||| Sbjct 1551077 GTCTCGGAGTGTATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGG 1551019 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||||| ||||| || || | | ||||| || || || || || | Sbjct 1551018 AATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGC 1550959 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 || || || |||||||| | ||||| | || || | ||||||| || | || Sbjct 1550958 GGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 1550899 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| || ||||| || || || | |||||| |||||||| Sbjct 1550898 CCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCA 1550854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353502930040