Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq7 356 2e-93
>seq7
Length=2761852
Score = 356 bits (394), Expect = 2e-93
Identities = 1098/1671 (66%), Gaps = 38/1671 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| || |||||||||||| | || |||
Sbjct 710944 AACTACCAATACTTTGGCTTCAAGACGCTGGAGCGATCATACCTCCTCAAGCTCGACGGC 710885
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || ||| | || || || ||
Sbjct 710884 AAGATTGTCGAGCGGCCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGAC 710825
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| | |||| | | | | | |||| |||| | ||| |||
Sbjct 710824 GACATTGAGCGTGTTCTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCATGCC 710765
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| ||||| ||||| || || |||||| | ||| |||| || || |||||| |
Sbjct 710764 TCCCCCACCCTCTTCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTC 710705
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| |||| ||| || || | ||||| || ||| ||||| | ||
Sbjct 710704 GAC-ATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGAT 710646
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || || || | | |||||| | | ||||||| || |||||
Sbjct 710645 CTCCAAGATGGCTGGTGGTATTGGTTTGAACGTCCACCGCATCCGTGCCACCGGCTCCTA 710586
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| ||| ||||| ||||||||||||||| | |||| ||||| || |||||||||||
Sbjct 710585 CATTGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAA 710526
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || ||||| |||||||| || | | | ||| | || || |||| ||
Sbjct 710525 CACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCT 710466
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||||||||||||| ||||| | ||| | || || || ||||||||||| || ||
Sbjct 710465 CGAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGTAAGGA 710406
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | || | ||||| ||| || || ||| | || || || || ||||| ||
Sbjct 710405 GGAGGTTCGCGCTCGCGACCTGTTCCTTGCCCTGTGGATTCCCGATCTCTTCATGAAGCG 710346
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|||||||| ||| | ||||| || | || ||||| ||||| || || || | ||
Sbjct 710345 TGTCGAGAAGAACCTGGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGCCTTGCTGA 710286
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCA 94432
| | || | ||||| | |||| | ||||| | || || | ||||
Sbjct 710285 CTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGCGAGGGACGTGGCC- 710227
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| ||| || ||| |||||||||| | ||| |||| | ||| ||||| |
Sbjct 710226 GCAAGACCATCCGCGCTCAGAAGCTGTGGTACTCCATCCTGGAGGCTCAGACCGAGACCG 710167
Query 94493 GTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551
||| |||| ||| | | |||||| | ||| |||| |||| ||||||| || ||||
Sbjct 710166 GTAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAACCTG 710108
Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611
|| ||| ||||| || || ||||| ||||| ||||||| | | || || |||
Sbjct 710107 GGAACTATCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCCGATGAG 710048
Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACG 94671
||||||| || ||| ||| ||| | ||| || | ||||| ||| |||||
Sbjct 710047 GTTGCTGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGT-CGA-----CTACA-- 709996
Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT---G 94728
| | | | | | ||| | || ||||| | || | |||| ||||| |
Sbjct 709995 ACGAAGGATGC-TACGACTTCAAGAAGCTTCACGAAGTCAC--CAAGG-TGGTCGTCCGT 709940
Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788
||||| ||| | | || || |||| ||||| |||| |||||| ||| |||
Sbjct 709939 AACCTCAACCGCATCATTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCAACAGCAAC 709880
Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848
|| || || || || || |||| || |||||| | || |||||| | | ||
Sbjct 709879 ATGCGCCACCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCCTCGCTCTG 709820
Query 94849 CGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907
|||||||||| || ||| || || ||| | |||| | | || ||||| | |||
Sbjct 709819 CGTCTGCCCTTTGAGTCTCCTGAGGCTCGCGAG-CTGAACAAGCAGATCTTCGAGACCAT 709761
Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACACG 94966
||| | | ||| | | ||| | | ||| | |||| || ||| || |||
Sbjct 709760 TTACCATGCCGCCCTTGAGGCTTCCATGGAGATTGCCAAGAT-TGAGGGC---CCGTACG 709705
Query 94967 AATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024
|||||||| ||||| ||| | | | ||||||| | |||| ||| | |||| ||
Sbjct 709704 AATCGTTCAAGGGATCACCC--GCATCTGAGGGCATCCTGCAGTATGACATGTGGGACGT 709647
Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGT 95082
|||||||| | |||| || ||||| ||| | | || || | | | ||||||
Sbjct 709646 CAAGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGCAGA--TCAAGGAGCACGGT 709589
Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142
|| ||| |||| || || ||||||||||| ||| ||| | |||||||| |||
Sbjct 709588 GTCCGCAACAGCTTGCTCGTCGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGC 709529
Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202
|||||||| | ||||| |||| ||| |||||| | ||| | | || || || || ||
Sbjct 709528 AACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGT 709469
Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261
|| |||| || ||||| || || |||||| | || | | || |||||
Sbjct 709468 GAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACAC-CGGCCTGTGGTC 709410
Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321
||| | ||||||| | | || ||||||||| ||||||||||||| | ||
Sbjct 709409 CGACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAACAT 709350
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| |||||||||||||| || ||||||||||| ||||||||| | |||||
Sbjct 709349 CCCCGAGGACATCAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGCG 709299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723119607480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |