Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq7 356 2e-93 >seq7 Length=2761852 Score = 356 bits (394), Expect = 2e-93 Identities = 1098/1671 (66%), Gaps = 38/1671 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || |||||||||||| | || ||| Sbjct 710944 AACTACCAATACTTTGGCTTCAAGACGCTGGAGCGATCATACCTCCTCAAGCTCGACGGC 710885 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||| || || || || | ||||| || ||| | || || || || Sbjct 710884 AAGATTGTCGAGCGGCCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGAC 710825 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | |||| | | | | | |||| |||| | ||| ||| Sbjct 710824 GACATTGAGCGTGTTCTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCATGCC 710765 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| ||||| ||||| || || |||||| | ||| |||| || || |||||| | Sbjct 710764 TCCCCCACCCTCTTCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTC 710705 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| |||| ||| || || | ||||| || ||| ||||| | || Sbjct 710704 GAC-ATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGAT 710646 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || || || | | |||||| | | ||||||| || ||||| Sbjct 710645 CTCCAAGATGGCTGGTGGTATTGGTTTGAACGTCCACCGCATCCGTGCCACCGGCTCCTA 710586 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||| ||||| ||||||||||||||| | |||| ||||| || ||||||||||| Sbjct 710585 CATTGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAA 710526 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||| |||||||| || | | | ||| | || || |||| || Sbjct 710525 CACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCT 710466 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||||||||||||| ||||| | ||| | || || || ||||||||||| || || Sbjct 710465 CGAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGTAAGGA 710406 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | || | ||||| ||| || || ||| | || || || || ||||| || Sbjct 710405 GGAGGTTCGCGCTCGCGACCTGTTCCTTGCCCTGTGGATTCCCGATCTCTTCATGAAGCG 710346 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||||| ||| | ||||| || | || ||||| ||||| || || || | || Sbjct 710345 TGTCGAGAAGAACCTGGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGCCTTGCTGA 710286 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCA 94432 | | || | ||||| | |||| | ||||| | || || | |||| Sbjct 710285 CTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGCGAGGGACGTGGCC- 710227 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| || ||| |||||||||| | ||| |||| | ||| ||||| | Sbjct 710226 GCAAGACCATCCGCGCTCAGAAGCTGTGGTACTCCATCCTGGAGGCTCAGACCGAGACCG 710167 Query 94493 GTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 ||| |||| ||| | | |||||| | ||| |||| |||| ||||||| || |||| Sbjct 710166 GTAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAACCTG 710108 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || ||| ||||| || || ||||| ||||| ||||||| | | || || ||| Sbjct 710107 GGAACTATCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCCGATGAG 710048 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACG 94671 ||||||| || ||| ||| ||| | ||| || | ||||| ||| ||||| Sbjct 710047 GTTGCTGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGT-CGA-----CTACA-- 709996 Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT---G 94728 | | | | | | ||| | || ||||| | || | |||| ||||| | Sbjct 709995 ACGAAGGATGC-TACGACTTCAAGAAGCTTCACGAAGTCAC--CAAGG-TGGTCGTCCGT 709940 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 ||||| ||| | | || || |||| ||||| |||| |||||| ||| ||| Sbjct 709939 AACCTCAACCGCATCATTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCAACAGCAAC 709880 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || || || || |||| || |||||| | || |||||| | | || Sbjct 709879 ATGCGCCACCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCCTCGCTCTG 709820 Query 94849 CGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907 |||||||||| || ||| || || ||| | |||| | | || ||||| | ||| Sbjct 709819 CGTCTGCCCTTTGAGTCTCCTGAGGCTCGCGAG-CTGAACAAGCAGATCTTCGAGACCAT 709761 Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACACG 94966 ||| | | ||| | | ||| | | ||| | |||| || ||| || ||| Sbjct 709760 TTACCATGCCGCCCTTGAGGCTTCCATGGAGATTGCCAAGAT-TGAGGGC---CCGTACG 709705 Query 94967 AATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 |||||||| ||||| ||| | | | ||||||| | |||| ||| | |||| || Sbjct 709704 AATCGTTCAAGGGATCACCC--GCATCTGAGGGCATCCTGCAGTATGACATGTGGGACGT 709647 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGT 95082 |||||||| | |||| || ||||| ||| | | || || | | | |||||| Sbjct 709646 CAAGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGCAGA--TCAAGGAGCACGGT 709589 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 || ||| |||| || || ||||||||||| ||| ||| | |||||||| ||| Sbjct 709588 GTCCGCAACAGCTTGCTCGTCGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGC 709529 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 |||||||| | ||||| |||| ||| |||||| | ||| | | || || || || || Sbjct 709528 AACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGT 709469 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261 || |||| || ||||| || || |||||| | || | | || ||||| Sbjct 709468 GAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACAC-CGGCCTGTGGTC 709410 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321 ||| | ||||||| | | || ||||||||| ||||||||||||| | || Sbjct 709409 CGACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAACAT 709350 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || |||||||||||||| || ||||||||||| ||||||||| | ||||| Sbjct 709349 CCCCGAGGACATCAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGCG 709299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723119607480